Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HLA-DQA1P01909 NXPH1-205ENST00000602349 1953 ntBASIC3.38□□□□□ -1.87
HLA-DQA1P01909 MFSD4BP1-201ENST00000513330 1552 ntBASIC3.38□□□□□ -1.87
HLA-DQA1P01909 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.38□□□□□ -1.87
HLA-DQA1P01909 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
HLA-DQA1P01909 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC3.37□□□□□ -1.87
HLA-DQA1P01909 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HLA-DQA1P01909 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HLA-DQA1P01909 RARSP1-201ENST00000542842 1418 ntBASIC3.37□□□□□ -1.87
HLA-DQA1P01909 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HLA-DQA1P01909 AC074029.4-201ENST00000624796 1859 ntBASIC3.37□□□□□ -1.87
HLA-DQA1P01909 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HLA-DQA1P01909 ASNSP1-201ENST00000518311 1939 ntBASIC3.37□□□□□ -1.87
HLA-DQA1P01909 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
HLA-DQA1P01909 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HLA-DQA1P01909 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HLA-DQA1P01909 RNA5SP322-201ENST00000363617 119 ntBASIC3.37□□□□□ -1.87
HLA-DQA1P01909 RNU1-89P-201ENST00000384592 164 ntBASIC3.37□□□□□ -1.87
HLA-DQA1P01909 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HLA-DQA1P01909 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HLA-DQA1P01909 AL589655.1-201ENST00000405398 482 ntBASIC3.37□□□□□ -1.87
HLA-DQA1P01909 U3.36-201ENST00000408418 213 ntBASIC3.37□□□□□ -1.87
HLA-DQA1P01909 SNORA74C-2-201ENST00000411179 201 ntBASIC3.37□□□□□ -1.87
HLA-DQA1P01909 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC3.37□□□□□ -1.87
HLA-DQA1P01909 AMD1P2-201ENST00000412936 992 ntBASIC3.37□□□□□ -1.87
HLA-DQA1P01909 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.37□□□□□ -1.87
HLA-DQA1P01909 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC3.37□□□□□ -1.87
HLA-DQA1P01909 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.37□□□□□ -1.87
HLA-DQA1P01909 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC3.37□□□□□ -1.87
HLA-DQA1P01909 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC3.37□□□□□ -1.87
HLA-DQA1P01909 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC3.37□□□□□ -1.87
HLA-DQA1P01909 FHP1-201ENST00000442741 703 ntBASIC3.37□□□□□ -1.87
HLA-DQA1P01909 AL935212.3-201ENST00000450729 284 ntBASIC3.37□□□□□ -1.87
HLA-DQA1P01909 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC3.37□□□□□ -1.87
HLA-DQA1P01909 RPL7AP52-201ENST00000458096 790 ntBASIC3.37□□□□□ -1.87
HLA-DQA1P01909 AC021205.1-201ENST00000468797 348 ntBASIC3.37□□□□□ -1.87
HLA-DQA1P01909 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.37□□□□□ -1.87
HLA-DQA1P01909 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC3.37□□□□□ -1.87
HLA-DQA1P01909 RN7SL808P-201ENST00000496066 299 ntBASIC3.37□□□□□ -1.87
HLA-DQA1P01909 RNU6-1308P-201ENST00000516817 103 ntBASIC3.37□□□□□ -1.87
HLA-DQA1P01909 IGHVIII-67-4-201ENST00000524281 296 ntBASIC3.37□□□□□ -1.87
HLA-DQA1P01909 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC3.37□□□□□ -1.87
HLA-DQA1P01909 AC092851.1-201ENST00000535964 478 ntBASIC3.37□□□□□ -1.87
HLA-DQA1P01909 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC3.37□□□□□ -1.87
HLA-DQA1P01909 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC3.37□□□□□ -1.87
HLA-DQA1P01909 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC3.37□□□□□ -1.87
HLA-DQA1P01909 MIR3176-201ENST00000582210 90 ntBASIC3.37□□□□□ -1.87
HLA-DQA1P01909 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC3.37□□□□□ -1.87
HLA-DQA1P01909 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HLA-DQA1P01909 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC3.37□□□□□ -1.87
HLA-DQA1P01909 BNIP3P32-201ENST00000600015 554 ntBASIC3.37□□□□□ -1.87
HLA-DQA1P01909 AL133247.2-201ENST00000603236 482 ntBASIC3.37□□□□□ -1.87
HLA-DQA1P01909 IGKV1OR2-9-201ENST00000603957 287 ntBASIC3.37□□□□□ -1.87
HLA-DQA1P01909 IGKV1OR2-11-201ENST00000604120 287 ntBASIC3.37□□□□□ -1.87
HLA-DQA1P01909 KATNBL1P1-201ENST00000605192 748 ntBASIC3.37□□□□□ -1.87
HLA-DQA1P01909 AC073137.1-201ENST00000605636 634 ntBASIC3.37□□□□□ -1.87
HLA-DQA1P01909 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC3.37□□□□□ -1.87
HLA-DQA1P01909 EIF3FP1-201ENST00000613970 806 ntBASIC3.37□□□□□ -1.87
HLA-DQA1P01909 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC3.37□□□□□ -1.87
HLA-DQA1P01909 MIR6886-201ENST00000619864 61 ntBASIC3.37□□□□□ -1.87
HLA-DQA1P01909 CR381572.2-201ENST00000624852 397 ntBASIC3.37□□□□□ -1.87
HLA-DQA1P01909 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC3.37□□□□□ -1.87
HLA-DQA1P01909 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC3.37□□□□□ -1.87
HLA-DQA1P01909 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC3.37□□□□□ -1.87
HLA-DQA1P01909 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
HLA-DQA1P01909 SPATA2P1-201ENST00000431223 2055 ntBASIC3.37□□□□□ -1.87
HLA-DQA1P01909 RMST-202ENST00000541282 2099 ntTSL 2 BASIC3.37□□□□□ -1.87
HLA-DQA1P01909 MAPK10-253ENST00000641010 4072 ntBASIC3.37□□□□□ -1.87
HLA-DQA1P01909 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HLA-DQA1P01909 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC3.37□□□□□ -1.87
HLA-DQA1P01909 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC3.37□□□□□ -1.87
HLA-DQA1P01909 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HLA-DQA1P01909 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
HLA-DQA1P01909 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HLA-DQA1P01909 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HLA-DQA1P01909 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HLA-DQA1P01909 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
HLA-DQA1P01909 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.36□□□□□ -1.87
HLA-DQA1P01909 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HLA-DQA1P01909 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.36□□□□□ -1.87
HLA-DQA1P01909 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HLA-DQA1P01909 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
HLA-DQA1P01909 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC3.36□□□□□ -1.87
HLA-DQA1P01909 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.36□□□□□ -1.87
HLA-DQA1P01909 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
HLA-DQA1P01909 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.36□□□□□ -1.87
HLA-DQA1P01909 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
HLA-DQA1P01909 SNURFL-201ENST00000309296 343 ntBASIC3.36□□□□□ -1.87
HLA-DQA1P01909 RNA5SP507-201ENST00000363603 121 ntBASIC3.36□□□□□ -1.87
HLA-DQA1P01909 MIR323B-201ENST00000385269 82 ntBASIC3.36□□□□□ -1.87
HLA-DQA1P01909 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HLA-DQA1P01909 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.36□□□□□ -1.87
HLA-DQA1P01909 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC3.36□□□□□ -1.87
HLA-DQA1P01909 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC3.36□□□□□ -1.87
HLA-DQA1P01909 AL590623.1-201ENST00000427864 105 ntBASIC3.36□□□□□ -1.87
HLA-DQA1P01909 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC3.36□□□□□ -1.87
HLA-DQA1P01909 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC3.36□□□□□ -1.87
HLA-DQA1P01909 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.36□□□□□ -1.87
HLA-DQA1P01909 PSMD10P3-201ENST00000437000 448 ntBASIC3.36□□□□□ -1.87
HLA-DQA1P01909 CNOT7P2-201ENST00000441051 832 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms