Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 AC004453.1-201ENST00000487895 408 ntBASIC4.85□□□□□ -1.63
GPC4O75487 HMGB1P38-201ENST00000490557 577 ntBASIC4.85□□□□□ -1.63
GPC4O75487 RPS27AP16-201ENST00000492222 470 ntBASIC4.85□□□□□ -1.63
GPC4O75487 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.85□□□□□ -1.63
GPC4O75487 OR5M14P-201ENST00000506803 618 ntBASIC4.85□□□□□ -1.63
GPC4O75487 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
GPC4O75487 RNA5SP392-201ENST00000516905 112 ntBASIC4.85□□□□□ -1.63
GPC4O75487 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
GPC4O75487 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
GPC4O75487 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.85□□□□□ -1.63
GPC4O75487 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.85□□□□□ -1.63
GPC4O75487 SULT1C2P2-201ENST00000562517 294 ntBASIC4.85□□□□□ -1.63
GPC4O75487 AC016180.1-201ENST00000567945 403 ntBASIC4.85□□□□□ -1.63
GPC4O75487 AC090330.1-201ENST00000588646 764 ntBASIC4.85□□□□□ -1.63
GPC4O75487 AC112503.1-201ENST00000608436 391 ntBASIC4.85□□□□□ -1.63
GPC4O75487 MIR7155-201ENST00000615925 56 ntBASIC4.85□□□□□ -1.63
GPC4O75487 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.85□□□□□ -1.63
GPC4O75487 AP003476.1-201ENST00000623984 516 ntBASIC4.85□□□□□ -1.63
GPC4O75487 AC004808.1-201ENST00000627671 721 ntBASIC4.85□□□□□ -1.63
GPC4O75487 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.85□□□□□ -1.63
GPC4O75487 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.85□□□□□ -1.63
GPC4O75487 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.85□□□□□ -1.63
GPC4O75487 AL132640.2-201ENST00000559968 1698 ntBASIC4.85□□□□□ -1.63
GPC4O75487 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
GPC4O75487 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.85□□□□□ -1.63
GPC4O75487 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
GPC4O75487 SALL4P2-201ENST00000423288 2910 ntBASIC4.85□□□□□ -1.63
GPC4O75487 AL672167.1-205ENST00000641112 3080 ntBASIC4.85□□□□□ -1.63
GPC4O75487 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.85□□□□□ -1.63
GPC4O75487 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
GPC4O75487 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
GPC4O75487 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.85□□□□□ -1.63
GPC4O75487 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.85□□□□□ -1.63
GPC4O75487 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
GPC4O75487 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
GPC4O75487 AC092435.4-201ENST00000623012 4159 ntBASIC4.84□□□□□ -1.63
GPC4O75487 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
GPC4O75487 CASC19-206ENST00000641028 1430 ntBASIC4.84□□□□□ -1.63
GPC4O75487 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
GPC4O75487 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
GPC4O75487 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
GPC4O75487 IGKV7-3-201ENST00000357453 298 ntBASIC4.84□□□□□ -1.63
GPC4O75487 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.84□□□□□ -1.63
GPC4O75487 RN7SKP104-201ENST00000362605 328 ntBASIC4.84□□□□□ -1.63
GPC4O75487 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.84□□□□□ -1.63
GPC4O75487 MIR122-201ENST00000385044 85 ntBASIC4.84□□□□□ -1.63
GPC4O75487 AL021331.1-201ENST00000402817 582 ntBASIC4.84□□□□□ -1.63
GPC4O75487 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC4.84□□□□□ -1.63
GPC4O75487 CYCSP10-201ENST00000417973 294 ntBASIC4.84□□□□□ -1.63
GPC4O75487 RBMY2QP-201ENST00000429799 1147 ntBASIC4.84□□□□□ -1.63
GPC4O75487 NMNAT1P2-201ENST00000435192 860 ntBASIC4.84□□□□□ -1.63
GPC4O75487 AC073052.1-201ENST00000440417 714 ntBASIC4.84□□□□□ -1.63
GPC4O75487 AC073587.1-201ENST00000447093 876 ntBASIC4.84□□□□□ -1.63
GPC4O75487 RPL31P44-201ENST00000447680 377 ntBASIC4.84□□□□□ -1.63
GPC4O75487 TRY2P-201ENST00000448860 689 ntBASIC4.84□□□□□ -1.63
GPC4O75487 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.84□□□□□ -1.63
GPC4O75487 RPS17P11-201ENST00000474297 293 ntBASIC4.84□□□□□ -1.63
GPC4O75487 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.84□□□□□ -1.63
GPC4O75487 AC020890.1-201ENST00000491837 504 ntBASIC4.84□□□□□ -1.63
GPC4O75487 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.84□□□□□ -1.63
GPC4O75487 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
GPC4O75487 AC069306.1-201ENST00000507006 843 ntBASIC4.84□□□□□ -1.63
GPC4O75487 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.84□□□□□ -1.63
GPC4O75487 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.84□□□□□ -1.63
GPC4O75487 AC110775.1-201ENST00000513721 462 ntBASIC4.84□□□□□ -1.63
GPC4O75487 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.84□□□□□ -1.63
GPC4O75487 OR5AZ1P-201ENST00000527448 943 ntBASIC4.84□□□□□ -1.63
GPC4O75487 AP002812.4-201ENST00000532139 286 ntBASIC4.84□□□□□ -1.63
GPC4O75487 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.84□□□□□ -1.63
GPC4O75487 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.84□□□□□ -1.63
GPC4O75487 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.84□□□□□ -1.63
GPC4O75487 RNF138P2-201ENST00000603490 592 ntBASIC4.84□□□□□ -1.63
GPC4O75487 AC087783.2-201ENST00000605070 562 ntBASIC4.84□□□□□ -1.63
GPC4O75487 AP001521.2-201ENST00000608772 546 ntBASIC4.84□□□□□ -1.63
GPC4O75487 AC124016.2-201ENST00000610058 665 ntBASIC4.84□□□□□ -1.63
GPC4O75487 AC097505.1-201ENST00000610199 565 ntBASIC4.84□□□□□ -1.63
GPC4O75487 FRG1HP-204ENST00000617940 757 ntBASIC4.84□□□□□ -1.63
GPC4O75487 AC091905.4-201ENST00000623432 202 ntBASIC4.84□□□□□ -1.63
GPC4O75487 AL353662.3-201ENST00000625131 237 ntBASIC4.84□□□□□ -1.63
GPC4O75487 AC126544.2-201ENST00000625174 749 ntBASIC4.84□□□□□ -1.63
GPC4O75487 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.84□□□□□ -1.63
GPC4O75487 U6.107-201ENST00000637108 79 ntBASIC4.84□□□□□ -1.63
GPC4O75487 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
GPC4O75487 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
GPC4O75487 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
GPC4O75487 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
GPC4O75487 RNF6P1-201ENST00000444889 1784 ntBASIC4.83□□□□□ -1.64
GPC4O75487 AL359922.3-201ENST00000624779 1670 ntBASIC4.83□□□□□ -1.64
GPC4O75487 CASC19-261ENST00000641853 1638 ntBASIC4.83□□□□□ -1.64
GPC4O75487 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
GPC4O75487 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.83□□□□□ -1.64
GPC4O75487 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.83□□□□□ -1.64
GPC4O75487 AL645568.2-201ENST00000432815 1337 ntBASIC4.83□□□□□ -1.64
GPC4O75487 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
GPC4O75487 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.83□□□□□ -1.64
GPC4O75487 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
GPC4O75487 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
GPC4O75487 SNORA70-201ENST00000384436 135 ntBASIC4.83□□□□□ -1.64
GPC4O75487 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
GPC4O75487 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 130.7 ms