Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.44□□□□□ -1.7
SLC28A1O00337 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.44□□□□□ -1.7
SLC28A1O00337 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.44□□□□□ -1.7
SLC28A1O00337 BGLT3-201ENST00000564523 994 ntBASIC4.44□□□□□ -1.7
SLC28A1O00337 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC4.44□□□□□ -1.7
SLC28A1O00337 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC4.44□□□□□ -1.7
SLC28A1O00337 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.44□□□□□ -1.7
SLC28A1O00337 AL671309.1-201ENST00000603750 544 ntBASIC4.44□□□□□ -1.7
SLC28A1O00337 AC026979.4-201ENST00000606555 645 ntBASIC4.44□□□□□ -1.7
SLC28A1O00337 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.44□□□□□ -1.7
SLC28A1O00337 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.44□□□□□ -1.7
SLC28A1O00337 MIR6729-201ENST00000618194 65 ntBASIC4.44□□□□□ -1.7
SLC28A1O00337 AC091905.2-201ENST00000623143 306 ntBASIC4.44□□□□□ -1.7
SLC28A1O00337 AC116563.2-201ENST00000624751 535 ntBASIC4.44□□□□□ -1.7
SLC28A1O00337 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SLC28A1O00337 AC090971.4-201ENST00000560291 1800 ntBASIC4.44□□□□□ -1.7
SLC28A1O00337 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.44□□□□□ -1.7
SLC28A1O00337 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
SLC28A1O00337 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.43□□□□□ -1.7
SLC28A1O00337 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
SLC28A1O00337 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SLC28A1O00337 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
SLC28A1O00337 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
SLC28A1O00337 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.43□□□□□ -1.7
SLC28A1O00337 IRF5P1-201ENST00000504852 2164 ntBASIC4.43□□□□□ -1.7
SLC28A1O00337 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SLC28A1O00337 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.43□□□□□ -1.7
SLC28A1O00337 RN7SKP104-201ENST00000362605 328 ntBASIC4.43□□□□□ -1.7
SLC28A1O00337 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SLC28A1O00337 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SLC28A1O00337 RNU6-317P-201ENST00000384031 107 ntBASIC4.43□□□□□ -1.7
SLC28A1O00337 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
SLC28A1O00337 FCF1P5-201ENST00000406490 482 ntBASIC4.43□□□□□ -1.7
SLC28A1O00337 RNU4-34P-201ENST00000410431 124 ntBASIC4.43□□□□□ -1.7
SLC28A1O00337 GSTM3P2-201ENST00000412746 530 ntBASIC4.43□□□□□ -1.7
SLC28A1O00337 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.43□□□□□ -1.7
SLC28A1O00337 GTF3AP1-201ENST00000416942 1004 ntBASIC4.43□□□□□ -1.7
SLC28A1O00337 MTND4P11-201ENST00000417020 1058 ntBASIC4.43□□□□□ -1.7
SLC28A1O00337 LINC01347-201ENST00000417964 355 ntBASIC4.43□□□□□ -1.7
SLC28A1O00337 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.43□□□□□ -1.7
SLC28A1O00337 AC009965.2-201ENST00000425328 970 ntBASIC4.43□□□□□ -1.7
SLC28A1O00337 SEC63P1-201ENST00000425785 1258 ntBASIC4.43□□□□□ -1.7
SLC28A1O00337 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.43□□□□□ -1.7
SLC28A1O00337 RPS20P1-201ENST00000434853 354 ntBASIC4.43□□□□□ -1.7
SLC28A1O00337 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.43□□□□□ -1.7
SLC28A1O00337 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.43□□□□□ -1.7
SLC28A1O00337 RPL7AP28-201ENST00000464513 571 ntBASIC4.43□□□□□ -1.7
SLC28A1O00337 AC004815.1-201ENST00000484185 331 ntBASIC4.43□□□□□ -1.7
SLC28A1O00337 AC104687.1-201ENST00000485829 412 ntBASIC4.43□□□□□ -1.7
SLC28A1O00337 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SLC28A1O00337 AC111193.1-201ENST00000504097 155 ntBASIC4.43□□□□□ -1.7
SLC28A1O00337 AC010468.3-201ENST00000508225 458 ntBASIC4.43□□□□□ -1.7
SLC28A1O00337 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SLC28A1O00337 AC090151.1-201ENST00000520784 730 ntBASIC4.43□□□□□ -1.7
SLC28A1O00337 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.43□□□□□ -1.7
SLC28A1O00337 SMARCE1P4-201ENST00000523647 241 ntBASIC4.43□□□□□ -1.7
SLC28A1O00337 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.43□□□□□ -1.7
SLC28A1O00337 AP001880.2-201ENST00000538233 448 ntBASIC4.43□□□□□ -1.7
SLC28A1O00337 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.43□□□□□ -1.7
SLC28A1O00337 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.43□□□□□ -1.7
SLC28A1O00337 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.43□□□□□ -1.7
SLC28A1O00337 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.43□□□□□ -1.7
SLC28A1O00337 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.43□□□□□ -1.7
SLC28A1O00337 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.43□□□□□ -1.7
SLC28A1O00337 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.43□□□□□ -1.7
SLC28A1O00337 ADAD1P2-201ENST00000588476 646 ntBASIC4.43□□□□□ -1.7
SLC28A1O00337 AC008759.1-201ENST00000589783 983 ntBASIC4.43□□□□□ -1.7
SLC28A1O00337 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.43□□□□□ -1.7
SLC28A1O00337 ZNF92P3-201ENST00000596594 954 ntBASIC4.43□□□□□ -1.7
SLC28A1O00337 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC4.43□□□□□ -1.7
SLC28A1O00337 AC023762.1-201ENST00000603280 584 ntBASIC4.43□□□□□ -1.7
SLC28A1O00337 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.43□□□□□ -1.7
SLC28A1O00337 AC243654.2-201ENST00000612843 443 ntBASIC4.43□□□□□ -1.7
SLC28A1O00337 AC073592.7-201ENST00000623659 507 ntBASIC4.43□□□□□ -1.7
SLC28A1O00337 FRG1DP-201ENST00000635586 771 ntBASIC4.43□□□□□ -1.7
SLC28A1O00337 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SLC28A1O00337 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.43□□□□□ -1.7
SLC28A1O00337 AC024341.1-201ENST00000526444 1552 ntBASIC4.43□□□□□ -1.7
SLC28A1O00337 AC104118.1-201ENST00000607625 1589 ntBASIC4.43□□□□□ -1.7
SLC28A1O00337 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SLC28A1O00337 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
SLC28A1O00337 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SLC28A1O00337 OR14L1P-202ENST00000641545 3009 ntBASIC4.43□□□□□ -1.7
SLC28A1O00337 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.42□□□□□ -1.7
SLC28A1O00337 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.42□□□□□ -1.7
SLC28A1O00337 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.42□□□□□ -1.7
SLC28A1O00337 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
SLC28A1O00337 RN7SKP229-201ENST00000410465 302 ntBASIC4.42□□□□□ -1.7
SLC28A1O00337 RNA5SP113-201ENST00000410486 84 ntBASIC4.42□□□□□ -1.7
SLC28A1O00337 RSU1P3-201ENST00000412878 835 ntBASIC4.42□□□□□ -1.7
SLC28A1O00337 RPL23AP27-201ENST00000415161 451 ntBASIC4.42□□□□□ -1.7
SLC28A1O00337 COX6B1P1-201ENST00000415962 213 ntBASIC4.42□□□□□ -1.7
SLC28A1O00337 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.42□□□□□ -1.7
SLC28A1O00337 AC016831.4-201ENST00000438302 307 ntBASIC4.42□□□□□ -1.7
SLC28A1O00337 AL353093.1-201ENST00000441292 436 ntBASIC4.42□□□□□ -1.7
SLC28A1O00337 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.42□□□□□ -1.7
SLC28A1O00337 AC097499.1-201ENST00000444277 208 ntBASIC4.42□□□□□ -1.7
SLC28A1O00337 RPL31P44-201ENST00000447680 377 ntBASIC4.42□□□□□ -1.7
SLC28A1O00337 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
SLC28A1O00337 AC108463.1-201ENST00000450258 347 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms