Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AC079880.2-201ENST00000603790 1213 ntBASIC4.8□□□□□ -1.64
CCDC188H7C350 AL391358.1-201ENST00000605342 190 ntBASIC4.8□□□□□ -1.64
CCDC188H7C350 U6.48-201ENST00000618523 106 ntBASIC4.8□□□□□ -1.64
CCDC188H7C350 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC188H7C350 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
CCDC188H7C350 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC188H7C350 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC188H7C350 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC188H7C350 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC188H7C350 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC188H7C350 HSPA8P18-201ENST00000439846 1928 ntBASIC4.8□□□□□ -1.64
CCDC188H7C350 Z98755.1-201ENST00000407015 1384 ntBASIC4.79□□□□□ -1.64
CCDC188H7C350 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.79□□□□□ -1.64
CCDC188H7C350 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CCDC188H7C350 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC188H7C350 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC188H7C350 AC120338.1-201ENST00000625074 1541 ntBASIC4.79□□□□□ -1.64
CCDC188H7C350 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CCDC188H7C350 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC4.79□□□□□ -1.64
CCDC188H7C350 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
CCDC188H7C350 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.79□□□□□ -1.64
CCDC188H7C350 AL078604.1-201ENST00000404609 466 ntBASIC4.79□□□□□ -1.64
CCDC188H7C350 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.79□□□□□ -1.64
CCDC188H7C350 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.79□□□□□ -1.64
CCDC188H7C350 GTF3AP1-201ENST00000416942 1004 ntBASIC4.79□□□□□ -1.64
CCDC188H7C350 AC009965.2-201ENST00000425328 970 ntBASIC4.79□□□□□ -1.64
CCDC188H7C350 FTH1P16-201ENST00000435241 552 ntBASIC4.79□□□□□ -1.64
CCDC188H7C350 RNFT1P2-201ENST00000443064 757 ntBASIC4.79□□□□□ -1.64
CCDC188H7C350 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.79□□□□□ -1.64
CCDC188H7C350 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.79□□□□□ -1.64
CCDC188H7C350 RPL7P55-201ENST00000450522 746 ntBASIC4.79□□□□□ -1.64
CCDC188H7C350 ISCUP1-201ENST00000454451 448 ntBASIC4.79□□□□□ -1.64
CCDC188H7C350 AC079841.1-201ENST00000481228 950 ntBASIC4.79□□□□□ -1.64
CCDC188H7C350 UBA52P7-201ENST00000486088 380 ntBASIC4.79□□□□□ -1.64
CCDC188H7C350 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC188H7C350 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC4.79□□□□□ -1.64
CCDC188H7C350 GAPDHP56-201ENST00000506031 988 ntBASIC4.79□□□□□ -1.64
CCDC188H7C350 AC112518.2-201ENST00000508565 425 ntBASIC4.79□□□□□ -1.64
CCDC188H7C350 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.79□□□□□ -1.64
CCDC188H7C350 MYL12AP1-201ENST00000518490 515 ntBASIC4.79□□□□□ -1.64
CCDC188H7C350 IGLV3-26-201ENST00000520756 302 ntBASIC4.79□□□□□ -1.64
CCDC188H7C350 SMARCE1P4-201ENST00000523647 241 ntBASIC4.79□□□□□ -1.64
CCDC188H7C350 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CCDC188H7C350 OR4R2P-201ENST00000530815 597 ntBASIC4.79□□□□□ -1.64
CCDC188H7C350 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC188H7C350 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CCDC188H7C350 AC107918.3-201ENST00000533272 382 ntBASIC4.79□□□□□ -1.64
CCDC188H7C350 AC069240.1-201ENST00000548774 375 ntBASIC4.79□□□□□ -1.64
CCDC188H7C350 AC004825.1-201ENST00000555068 586 ntBASIC4.79□□□□□ -1.64
CCDC188H7C350 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.79□□□□□ -1.64
CCDC188H7C350 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.79□□□□□ -1.64
CCDC188H7C350 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC4.79□□□□□ -1.64
CCDC188H7C350 ZNF92P3-201ENST00000596594 954 ntBASIC4.79□□□□□ -1.64
CCDC188H7C350 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.79□□□□□ -1.64
CCDC188H7C350 AC010201.1-201ENST00000605051 540 ntBASIC4.79□□□□□ -1.64
CCDC188H7C350 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC188H7C350 AC022467.1-201ENST00000614738 749 ntBASIC4.79□□□□□ -1.64
CCDC188H7C350 SNX18P1Y-201ENST00000616231 511 ntBASIC4.79□□□□□ -1.64
CCDC188H7C350 AL138721.1-201ENST00000616756 179 ntBASIC4.79□□□□□ -1.64
CCDC188H7C350 AC015908.5-201ENST00000623289 343 ntBASIC4.79□□□□□ -1.64
CCDC188H7C350 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CCDC188H7C350 LINC01739-205ENST00000641890 573 ntBASIC4.79□□□□□ -1.64
CCDC188H7C350 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC188H7C350 AC009229.4-201ENST00000623854 1947 ntBASIC4.79□□□□□ -1.64
CCDC188H7C350 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC188H7C350 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC188H7C350 AL391684.1-202ENST00000641293 1636 ntBASIC4.79□□□□□ -1.64
CCDC188H7C350 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
CCDC188H7C350 CR788268.1-201ENST00000603931 1809 ntBASIC4.79□□□□□ -1.64
CCDC188H7C350 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.78□□□□□ -1.64
CCDC188H7C350 AL450326.2-201ENST00000421913 1962 ntBASIC4.78□□□□□ -1.64
CCDC188H7C350 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.78□□□□□ -1.64
CCDC188H7C350 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC188H7C350 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC188H7C350 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.78□□□□□ -1.64
CCDC188H7C350 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.78□□□□□ -1.64
CCDC188H7C350 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
CCDC188H7C350 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CCDC188H7C350 RNU6-252P-201ENST00000363232 107 ntBASIC4.78□□□□□ -1.64
CCDC188H7C350 MIR223-201ENST00000385204 110 ntBASIC4.78□□□□□ -1.64
CCDC188H7C350 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CCDC188H7C350 SNORA40.4-201ENST00000390971 128 ntBASIC4.78□□□□□ -1.64
CCDC188H7C350 ATP5F1P6-201ENST00000402768 767 ntBASIC4.78□□□□□ -1.64
CCDC188H7C350 AL160275.2-201ENST00000412010 394 ntBASIC4.78□□□□□ -1.64
CCDC188H7C350 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC188H7C350 AC013404.1-201ENST00000413068 249 ntBASIC4.78□□□□□ -1.64
CCDC188H7C350 VTA1P1-201ENST00000414044 866 ntBASIC4.78□□□□□ -1.64
CCDC188H7C350 RPS24P8-201ENST00000431490 402 ntBASIC4.78□□□□□ -1.64
CCDC188H7C350 AL353597.2-202ENST00000434901 373 ntBASIC4.78□□□□□ -1.64
CCDC188H7C350 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.78□□□□□ -1.64
CCDC188H7C350 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.78□□□□□ -1.64
CCDC188H7C350 GEMIN8P3-201ENST00000445417 720 ntBASIC4.78□□□□□ -1.64
CCDC188H7C350 TPTE2P6-202ENST00000445572 1007 ntBASIC4.78□□□□□ -1.64
CCDC188H7C350 RPL7L1P1-201ENST00000448259 785 ntBASIC4.78□□□□□ -1.64
CCDC188H7C350 CYCSP42-201ENST00000450823 238 ntBASIC4.78□□□□□ -1.64
CCDC188H7C350 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC188H7C350 AL606490.1-201ENST00000452266 765 ntBASIC4.78□□□□□ -1.64
CCDC188H7C350 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC188H7C350 AC092905.1-201ENST00000467527 949 ntBASIC4.78□□□□□ -1.64
CCDC188H7C350 COPS8P2-201ENST00000473228 627 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms