Protein–RNA interactions for Protein: Q9Z0H8

Clip2, CAP-Gly domain-containing linker protein 2, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip2Q9Z0H8 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clip2Q9Z0H8 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Clip2Q9Z0H8 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC19.33■□□□□ 0.69
Clip2Q9Z0H8 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Clip2Q9Z0H8 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC19.33■□□□□ 0.68
Clip2Q9Z0H8 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Clip2Q9Z0H8 Gm17807-201ENSMUST00000186869 298 ntBASIC19.33■□□□□ 0.68
Clip2Q9Z0H8 Ighv6-1-201ENSMUST00000193612 343 ntBASIC19.33■□□□□ 0.68
Clip2Q9Z0H8 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC19.33■□□□□ 0.68
Clip2Q9Z0H8 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC19.33■□□□□ 0.68
Clip2Q9Z0H8 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Clip2Q9Z0H8 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Clip2Q9Z0H8 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Clip2Q9Z0H8 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Clip2Q9Z0H8 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clip2Q9Z0H8 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clip2Q9Z0H8 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clip2Q9Z0H8 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Clip2Q9Z0H8 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clip2Q9Z0H8 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clip2Q9Z0H8 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clip2Q9Z0H8 Gm15794-201ENSMUST00000120182 631 ntBASIC19.32■□□□□ 0.68
Clip2Q9Z0H8 Olfr129-201ENSMUST00000122318 993 ntBASIC19.32■□□□□ 0.68
Clip2Q9Z0H8 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Clip2Q9Z0H8 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Clip2Q9Z0H8 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clip2Q9Z0H8 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clip2Q9Z0H8 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clip2Q9Z0H8 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clip2Q9Z0H8 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clip2Q9Z0H8 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Clip2Q9Z0H8 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clip2Q9Z0H8 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Clip2Q9Z0H8 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Clip2Q9Z0H8 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Clip2Q9Z0H8 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Clip2Q9Z0H8 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clip2Q9Z0H8 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clip2Q9Z0H8 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clip2Q9Z0H8 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clip2Q9Z0H8 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC19.31■□□□□ 0.68
Clip2Q9Z0H8 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clip2Q9Z0H8 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Clip2Q9Z0H8 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC19.31■□□□□ 0.68
Clip2Q9Z0H8 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Clip2Q9Z0H8 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clip2Q9Z0H8 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Clip2Q9Z0H8 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clip2Q9Z0H8 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC19.31■□□□□ 0.68
Clip2Q9Z0H8 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clip2Q9Z0H8 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Clip2Q9Z0H8 Gm6598-201ENSMUST00000202719 2615 ntBASIC19.31■□□□□ 0.68
Clip2Q9Z0H8 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clip2Q9Z0H8 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clip2Q9Z0H8 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clip2Q9Z0H8 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clip2Q9Z0H8 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clip2Q9Z0H8 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Clip2Q9Z0H8 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clip2Q9Z0H8 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clip2Q9Z0H8 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Clip2Q9Z0H8 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clip2Q9Z0H8 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Clip2Q9Z0H8 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC19.3■□□□□ 0.68
Clip2Q9Z0H8 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC19.3■□□□□ 0.68
Clip2Q9Z0H8 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Clip2Q9Z0H8 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Clip2Q9Z0H8 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clip2Q9Z0H8 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Clip2Q9Z0H8 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Clip2Q9Z0H8 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clip2Q9Z0H8 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC19.29■□□□□ 0.68
Clip2Q9Z0H8 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clip2Q9Z0H8 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC19.29■□□□□ 0.68
Clip2Q9Z0H8 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clip2Q9Z0H8 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Clip2Q9Z0H8 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clip2Q9Z0H8 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clip2Q9Z0H8 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Clip2Q9Z0H8 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clip2Q9Z0H8 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Clip2Q9Z0H8 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clip2Q9Z0H8 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clip2Q9Z0H8 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC19.28■□□□□ 0.68
Clip2Q9Z0H8 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Clip2Q9Z0H8 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clip2Q9Z0H8 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clip2Q9Z0H8 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clip2Q9Z0H8 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clip2Q9Z0H8 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Clip2Q9Z0H8 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clip2Q9Z0H8 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clip2Q9Z0H8 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Clip2Q9Z0H8 Mir3081-201ENSMUST00000175305 84 ntBASIC19.28■□□□□ 0.68
Clip2Q9Z0H8 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Clip2Q9Z0H8 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Clip2Q9Z0H8 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clip2Q9Z0H8 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clip2Q9Z0H8 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Clip2Q9Z0H8 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms