Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cldn3Q9Z0G9 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cldn3Q9Z0G9 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Cldn3Q9Z0G9 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Cldn3Q9Z0G9 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Cldn3Q9Z0G9 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.83■□□□□ 0.29
Cldn3Q9Z0G9 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.83■□□□□ 0.28
Cldn3Q9Z0G9 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
Cldn3Q9Z0G9 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cldn3Q9Z0G9 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.83■□□□□ 0.28
Cldn3Q9Z0G9 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cldn3Q9Z0G9 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cldn3Q9Z0G9 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cldn3Q9Z0G9 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cldn3Q9Z0G9 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cldn3Q9Z0G9 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cldn3Q9Z0G9 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Cldn3Q9Z0G9 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cldn3Q9Z0G9 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cldn3Q9Z0G9 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cldn3Q9Z0G9 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cldn3Q9Z0G9 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.82■□□□□ 0.28
Cldn3Q9Z0G9 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Cldn3Q9Z0G9 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cldn3Q9Z0G9 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Cldn3Q9Z0G9 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.82■□□□□ 0.28
Cldn3Q9Z0G9 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cldn3Q9Z0G9 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cldn3Q9Z0G9 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cldn3Q9Z0G9 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cldn3Q9Z0G9 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cldn3Q9Z0G9 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cldn3Q9Z0G9 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cldn3Q9Z0G9 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cldn3Q9Z0G9 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.81■□□□□ 0.28
Cldn3Q9Z0G9 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.81■□□□□ 0.28
Cldn3Q9Z0G9 Gm22697-201ENSMUST00000175194 63 ntBASIC16.81■□□□□ 0.28
Cldn3Q9Z0G9 Gm27389-201ENSMUST00000183622 195 ntBASIC16.81■□□□□ 0.28
Cldn3Q9Z0G9 Gm18101-201ENSMUST00000215769 548 ntBASIC16.81■□□□□ 0.28
Cldn3Q9Z0G9 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cldn3Q9Z0G9 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Cldn3Q9Z0G9 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cldn3Q9Z0G9 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Cldn3Q9Z0G9 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cldn3Q9Z0G9 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cldn3Q9Z0G9 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cldn3Q9Z0G9 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cldn3Q9Z0G9 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cldn3Q9Z0G9 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cldn3Q9Z0G9 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Cldn3Q9Z0G9 Gm26039-201ENSMUST00000158152 144 ntBASIC16.8■□□□□ 0.28
Cldn3Q9Z0G9 Gm10231-201ENSMUST00000181584 441 ntBASIC16.8■□□□□ 0.28
Cldn3Q9Z0G9 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cldn3Q9Z0G9 Gm10175-202ENSMUST00000208752 441 ntBASIC16.8■□□□□ 0.28
Cldn3Q9Z0G9 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cldn3Q9Z0G9 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Cldn3Q9Z0G9 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Cldn3Q9Z0G9 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.8■□□□□ 0.28
Cldn3Q9Z0G9 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cldn3Q9Z0G9 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cldn3Q9Z0G9 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cldn3Q9Z0G9 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
Cldn3Q9Z0G9 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cldn3Q9Z0G9 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cldn3Q9Z0G9 Phf7-203ENSMUST00000226565 1971 ntBASIC16.79■□□□□ 0.28
Cldn3Q9Z0G9 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cldn3Q9Z0G9 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cldn3Q9Z0G9 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cldn3Q9Z0G9 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cldn3Q9Z0G9 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.79■□□□□ 0.28
Cldn3Q9Z0G9 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Cldn3Q9Z0G9 Gm18115-201ENSMUST00000221209 621 ntBASIC16.79■□□□□ 0.28
Cldn3Q9Z0G9 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cldn3Q9Z0G9 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cldn3Q9Z0G9 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cldn3Q9Z0G9 Gm10566-201ENSMUST00000086739 996 ntBASIC16.79■□□□□ 0.28
Cldn3Q9Z0G9 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Cldn3Q9Z0G9 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Cldn3Q9Z0G9 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cldn3Q9Z0G9 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cldn3Q9Z0G9 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
Cldn3Q9Z0G9 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cldn3Q9Z0G9 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cldn3Q9Z0G9 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cldn3Q9Z0G9 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Cldn3Q9Z0G9 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.79■□□□□ 0.28
Cldn3Q9Z0G9 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cldn3Q9Z0G9 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Cldn3Q9Z0G9 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cldn3Q9Z0G9 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cldn3Q9Z0G9 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cldn3Q9Z0G9 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cldn3Q9Z0G9 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cldn3Q9Z0G9 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cldn3Q9Z0G9 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cldn3Q9Z0G9 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Cldn3Q9Z0G9 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cldn3Q9Z0G9 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Cldn3Q9Z0G9 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cldn3Q9Z0G9 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms