Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Col13a1Q9R1N9 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col13a1Q9R1N9 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col13a1Q9R1N9 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col13a1Q9R1N9 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col13a1Q9R1N9 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col13a1Q9R1N9 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col13a1Q9R1N9 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col13a1Q9R1N9 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC14.11□□□□□ -0.15
Col13a1Q9R1N9 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col13a1Q9R1N9 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col13a1Q9R1N9 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Col13a1Q9R1N9 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Col13a1Q9R1N9 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col13a1Q9R1N9 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Col13a1Q9R1N9 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col13a1Q9R1N9 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col13a1Q9R1N9 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.11□□□□□ -0.15
Col13a1Q9R1N9 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Col13a1Q9R1N9 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.11□□□□□ -0.15
Col13a1Q9R1N9 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.11□□□□□ -0.15
Col13a1Q9R1N9 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col13a1Q9R1N9 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col13a1Q9R1N9 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col13a1Q9R1N9 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Col13a1Q9R1N9 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Col13a1Q9R1N9 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col13a1Q9R1N9 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col13a1Q9R1N9 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col13a1Q9R1N9 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC14.1□□□□□ -0.15
Col13a1Q9R1N9 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Col13a1Q9R1N9 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col13a1Q9R1N9 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col13a1Q9R1N9 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Col13a1Q9R1N9 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col13a1Q9R1N9 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col13a1Q9R1N9 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col13a1Q9R1N9 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Col13a1Q9R1N9 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col13a1Q9R1N9 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col13a1Q9R1N9 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col13a1Q9R1N9 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Col13a1Q9R1N9 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.1□□□□□ -0.15
Col13a1Q9R1N9 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col13a1Q9R1N9 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col13a1Q9R1N9 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col13a1Q9R1N9 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col13a1Q9R1N9 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col13a1Q9R1N9 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col13a1Q9R1N9 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col13a1Q9R1N9 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col13a1Q9R1N9 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col13a1Q9R1N9 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col13a1Q9R1N9 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Col13a1Q9R1N9 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col13a1Q9R1N9 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col13a1Q9R1N9 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col13a1Q9R1N9 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col13a1Q9R1N9 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col13a1Q9R1N9 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.09□□□□□ -0.15
Col13a1Q9R1N9 Mir5131-201ENSMUST00000175426 93 ntBASIC14.09□□□□□ -0.15
Col13a1Q9R1N9 Gm27702-201ENSMUST00000184512 56 ntBASIC14.09□□□□□ -0.15
Col13a1Q9R1N9 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col13a1Q9R1N9 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.09□□□□□ -0.15
Col13a1Q9R1N9 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.09□□□□□ -0.15
Col13a1Q9R1N9 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col13a1Q9R1N9 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col13a1Q9R1N9 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col13a1Q9R1N9 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col13a1Q9R1N9 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col13a1Q9R1N9 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.09□□□□□ -0.15
Col13a1Q9R1N9 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC14.09□□□□□ -0.15
Col13a1Q9R1N9 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC14.09□□□□□ -0.15
Col13a1Q9R1N9 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col13a1Q9R1N9 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col13a1Q9R1N9 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
Col13a1Q9R1N9 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Col13a1Q9R1N9 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Col13a1Q9R1N9 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
Col13a1Q9R1N9 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Col13a1Q9R1N9 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col13a1Q9R1N9 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Col13a1Q9R1N9 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col13a1Q9R1N9 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col13a1Q9R1N9 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col13a1Q9R1N9 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col13a1Q9R1N9 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col13a1Q9R1N9 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.08□□□□□ -0.16
Col13a1Q9R1N9 Gm43575-201ENSMUST00000196420 516 ntBASIC14.08□□□□□ -0.16
Col13a1Q9R1N9 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC14.08□□□□□ -0.16
Col13a1Q9R1N9 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Col13a1Q9R1N9 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.08□□□□□ -0.16
Col13a1Q9R1N9 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col13a1Q9R1N9 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col13a1Q9R1N9 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col13a1Q9R1N9 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col13a1Q9R1N9 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col13a1Q9R1N9 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col13a1Q9R1N9 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col13a1Q9R1N9 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms