Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Clcn2Q9R0A1 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clcn2Q9R0A1 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clcn2Q9R0A1 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Clcn2Q9R0A1 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clcn2Q9R0A1 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17■□□□□ 0.31
Clcn2Q9R0A1 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Clcn2Q9R0A1 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Clcn2Q9R0A1 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Clcn2Q9R0A1 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Clcn2Q9R0A1 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17■□□□□ 0.31
Clcn2Q9R0A1 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17■□□□□ 0.31
Clcn2Q9R0A1 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Clcn2Q9R0A1 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Clcn2Q9R0A1 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Clcn2Q9R0A1 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
Clcn2Q9R0A1 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Clcn2Q9R0A1 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
Clcn2Q9R0A1 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Clcn2Q9R0A1 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Clcn2Q9R0A1 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Clcn2Q9R0A1 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Clcn2Q9R0A1 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Clcn2Q9R0A1 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clcn2Q9R0A1 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Clcn2Q9R0A1 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clcn2Q9R0A1 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clcn2Q9R0A1 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Clcn2Q9R0A1 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.99■□□□□ 0.31
Clcn2Q9R0A1 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clcn2Q9R0A1 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Clcn2Q9R0A1 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clcn2Q9R0A1 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clcn2Q9R0A1 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clcn2Q9R0A1 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clcn2Q9R0A1 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Clcn2Q9R0A1 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clcn2Q9R0A1 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clcn2Q9R0A1 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Clcn2Q9R0A1 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Clcn2Q9R0A1 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Clcn2Q9R0A1 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clcn2Q9R0A1 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clcn2Q9R0A1 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
Clcn2Q9R0A1 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Clcn2Q9R0A1 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Clcn2Q9R0A1 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.98■□□□□ 0.31
Clcn2Q9R0A1 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clcn2Q9R0A1 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clcn2Q9R0A1 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clcn2Q9R0A1 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clcn2Q9R0A1 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.98■□□□□ 0.31
Clcn2Q9R0A1 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clcn2Q9R0A1 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clcn2Q9R0A1 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.97■□□□□ 0.31
Clcn2Q9R0A1 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Clcn2Q9R0A1 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clcn2Q9R0A1 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clcn2Q9R0A1 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Clcn2Q9R0A1 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.97■□□□□ 0.31
Clcn2Q9R0A1 Gm11539-201ENSMUST00000119837 557 ntBASIC16.97■□□□□ 0.31
Clcn2Q9R0A1 Gm13436-201ENSMUST00000120418 567 ntBASIC16.97■□□□□ 0.31
Clcn2Q9R0A1 Gm13559-201ENSMUST00000120476 863 ntBASIC16.97■□□□□ 0.31
Clcn2Q9R0A1 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Clcn2Q9R0A1 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.97■□□□□ 0.31
Clcn2Q9R0A1 Gm43799-201ENSMUST00000201845 579 ntBASIC16.97■□□□□ 0.31
Clcn2Q9R0A1 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clcn2Q9R0A1 Gm30025-201ENSMUST00000218555 728 ntBASIC16.97■□□□□ 0.31
Clcn2Q9R0A1 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clcn2Q9R0A1 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Clcn2Q9R0A1 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Clcn2Q9R0A1 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clcn2Q9R0A1 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clcn2Q9R0A1 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clcn2Q9R0A1 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Clcn2Q9R0A1 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
Clcn2Q9R0A1 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clcn2Q9R0A1 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clcn2Q9R0A1 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clcn2Q9R0A1 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clcn2Q9R0A1 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clcn2Q9R0A1 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clcn2Q9R0A1 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.96■□□□□ 0.31
Clcn2Q9R0A1 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Clcn2Q9R0A1 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Clcn2Q9R0A1 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.96■□□□□ 0.31
Clcn2Q9R0A1 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Clcn2Q9R0A1 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.96■□□□□ 0.31
Clcn2Q9R0A1 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.96■□□□□ 0.31
Clcn2Q9R0A1 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.96■□□□□ 0.31
Clcn2Q9R0A1 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Clcn2Q9R0A1 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Clcn2Q9R0A1 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Clcn2Q9R0A1 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.96■□□□□ 0.31
Clcn2Q9R0A1 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clcn2Q9R0A1 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Clcn2Q9R0A1 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.31
Clcn2Q9R0A1 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clcn2Q9R0A1 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Clcn2Q9R0A1 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms