Protein–RNA interactions for Protein: Q9EQG9

Col4a3bp, Collagen type IV alpha-3-binding protein, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bpQ9EQG9 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col4a3bpQ9EQG9 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC19.08■□□□□ 0.64
Col4a3bpQ9EQG9 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col4a3bpQ9EQG9 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col4a3bpQ9EQG9 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col4a3bpQ9EQG9 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col4a3bpQ9EQG9 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Col4a3bpQ9EQG9 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col4a3bpQ9EQG9 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col4a3bpQ9EQG9 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.64
Col4a3bpQ9EQG9 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col4a3bpQ9EQG9 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Col4a3bpQ9EQG9 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col4a3bpQ9EQG9 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col4a3bpQ9EQG9 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col4a3bpQ9EQG9 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col4a3bpQ9EQG9 Gm43353-201ENSMUST00000199224 1295 ntBASIC19.07■□□□□ 0.64
Col4a3bpQ9EQG9 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Col4a3bpQ9EQG9 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Col4a3bpQ9EQG9 Gm7791-201ENSMUST00000219066 539 ntBASIC19.07■□□□□ 0.64
Col4a3bpQ9EQG9 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC19.07■□□□□ 0.64
Col4a3bpQ9EQG9 AC159205.6-201ENSMUST00000224935 887 ntBASIC19.07■□□□□ 0.64
Col4a3bpQ9EQG9 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC19.07■□□□□ 0.64
Col4a3bpQ9EQG9 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col4a3bpQ9EQG9 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col4a3bpQ9EQG9 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Col4a3bpQ9EQG9 Gm45203-201ENSMUST00000206384 1831 ntBASIC19.07■□□□□ 0.64
Col4a3bpQ9EQG9 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Col4a3bpQ9EQG9 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Col4a3bpQ9EQG9 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col4a3bpQ9EQG9 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col4a3bpQ9EQG9 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col4a3bpQ9EQG9 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC19.06■□□□□ 0.64
Col4a3bpQ9EQG9 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC19.06■□□□□ 0.64
Col4a3bpQ9EQG9 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col4a3bpQ9EQG9 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col4a3bpQ9EQG9 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col4a3bpQ9EQG9 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col4a3bpQ9EQG9 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Col4a3bpQ9EQG9 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Col4a3bpQ9EQG9 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Col4a3bpQ9EQG9 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC19.05■□□□□ 0.64
Col4a3bpQ9EQG9 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Col4a3bpQ9EQG9 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col4a3bpQ9EQG9 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Col4a3bpQ9EQG9 Wnt10b-204ENSMUST00000226655 1807 ntBASIC19.05■□□□□ 0.64
Col4a3bpQ9EQG9 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Col4a3bpQ9EQG9 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col4a3bpQ9EQG9 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col4a3bpQ9EQG9 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col4a3bpQ9EQG9 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Col4a3bpQ9EQG9 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col4a3bpQ9EQG9 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col4a3bpQ9EQG9 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Col4a3bpQ9EQG9 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Col4a3bpQ9EQG9 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col4a3bpQ9EQG9 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col4a3bpQ9EQG9 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Col4a3bpQ9EQG9 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col4a3bpQ9EQG9 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC19.04■□□□□ 0.64
Col4a3bpQ9EQG9 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Col4a3bpQ9EQG9 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
Col4a3bpQ9EQG9 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col4a3bpQ9EQG9 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col4a3bpQ9EQG9 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
Col4a3bpQ9EQG9 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Col4a3bpQ9EQG9 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Col4a3bpQ9EQG9 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col4a3bpQ9EQG9 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col4a3bpQ9EQG9 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col4a3bpQ9EQG9 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col4a3bpQ9EQG9 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col4a3bpQ9EQG9 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col4a3bpQ9EQG9 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col4a3bpQ9EQG9 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col4a3bpQ9EQG9 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.03■□□□□ 0.64
Col4a3bpQ9EQG9 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col4a3bpQ9EQG9 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC19.03■□□□□ 0.64
Col4a3bpQ9EQG9 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col4a3bpQ9EQG9 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col4a3bpQ9EQG9 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Col4a3bpQ9EQG9 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col4a3bpQ9EQG9 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Col4a3bpQ9EQG9 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col4a3bpQ9EQG9 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col4a3bpQ9EQG9 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Col4a3bpQ9EQG9 Gm18958-201ENSMUST00000174258 762 ntBASIC19.03■□□□□ 0.64
Col4a3bpQ9EQG9 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Col4a3bpQ9EQG9 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Col4a3bpQ9EQG9 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col4a3bpQ9EQG9 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col4a3bpQ9EQG9 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col4a3bpQ9EQG9 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Col4a3bpQ9EQG9 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC19.03■□□□□ 0.64
Col4a3bpQ9EQG9 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col4a3bpQ9EQG9 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col4a3bpQ9EQG9 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC19.02■□□□□ 0.64
Col4a3bpQ9EQG9 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Col4a3bpQ9EQG9 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col4a3bpQ9EQG9 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms