Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Gtf3c6Q9D8P7 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gtf3c6Q9D8P7 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Gtf3c6Q9D8P7 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Gtf3c6Q9D8P7 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gtf3c6Q9D8P7 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gtf3c6Q9D8P7 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Gtf3c6Q9D8P7 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gtf3c6Q9D8P7 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Gtf3c6Q9D8P7 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Gtf3c6Q9D8P7 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
Gtf3c6Q9D8P7 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gtf3c6Q9D8P7 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gtf3c6Q9D8P7 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.75■□□□□ 0.43
Gtf3c6Q9D8P7 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gtf3c6Q9D8P7 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gtf3c6Q9D8P7 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Gtf3c6Q9D8P7 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Gtf3c6Q9D8P7 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Gtf3c6Q9D8P7 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Gtf3c6Q9D8P7 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gtf3c6Q9D8P7 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
Gtf3c6Q9D8P7 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gtf3c6Q9D8P7 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gtf3c6Q9D8P7 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.75■□□□□ 0.43
Gtf3c6Q9D8P7 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Gtf3c6Q9D8P7 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Gtf3c6Q9D8P7 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gtf3c6Q9D8P7 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Gtf3c6Q9D8P7 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gtf3c6Q9D8P7 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gtf3c6Q9D8P7 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gtf3c6Q9D8P7 Gm13559-201ENSMUST00000120476 863 ntBASIC17.74■□□□□ 0.43
Gtf3c6Q9D8P7 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gtf3c6Q9D8P7 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.74■□□□□ 0.43
Gtf3c6Q9D8P7 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.74■□□□□ 0.43
Gtf3c6Q9D8P7 Gm18115-201ENSMUST00000221209 621 ntBASIC17.74■□□□□ 0.43
Gtf3c6Q9D8P7 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gtf3c6Q9D8P7 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gtf3c6Q9D8P7 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Gtf3c6Q9D8P7 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Gtf3c6Q9D8P7 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gtf3c6Q9D8P7 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.73■□□□□ 0.43
Gtf3c6Q9D8P7 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gtf3c6Q9D8P7 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Gtf3c6Q9D8P7 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gtf3c6Q9D8P7 Actl10-202ENSMUST00000226583 1501 ntBASIC17.73■□□□□ 0.43
Gtf3c6Q9D8P7 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gtf3c6Q9D8P7 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.73■□□□□ 0.43
Gtf3c6Q9D8P7 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.73■□□□□ 0.43
Gtf3c6Q9D8P7 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Gtf3c6Q9D8P7 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gtf3c6Q9D8P7 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gtf3c6Q9D8P7 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gtf3c6Q9D8P7 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Gtf3c6Q9D8P7 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Gtf3c6Q9D8P7 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gtf3c6Q9D8P7 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gtf3c6Q9D8P7 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gtf3c6Q9D8P7 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gtf3c6Q9D8P7 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gtf3c6Q9D8P7 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gtf3c6Q9D8P7 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gtf3c6Q9D8P7 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gtf3c6Q9D8P7 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Gtf3c6Q9D8P7 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.72■□□□□ 0.43
Gtf3c6Q9D8P7 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gtf3c6Q9D8P7 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gtf3c6Q9D8P7 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Gtf3c6Q9D8P7 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gtf3c6Q9D8P7 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gtf3c6Q9D8P7 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gtf3c6Q9D8P7 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Gtf3c6Q9D8P7 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Gtf3c6Q9D8P7 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Gtf3c6Q9D8P7 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gtf3c6Q9D8P7 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gtf3c6Q9D8P7 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gtf3c6Q9D8P7 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gtf3c6Q9D8P7 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gtf3c6Q9D8P7 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Gtf3c6Q9D8P7 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gtf3c6Q9D8P7 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Gtf3c6Q9D8P7 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Gtf3c6Q9D8P7 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gtf3c6Q9D8P7 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gtf3c6Q9D8P7 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Gtf3c6Q9D8P7 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Gtf3c6Q9D8P7 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gtf3c6Q9D8P7 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gtf3c6Q9D8P7 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Gtf3c6Q9D8P7 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.71■□□□□ 0.43
Gtf3c6Q9D8P7 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.71■□□□□ 0.43
Gtf3c6Q9D8P7 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gtf3c6Q9D8P7 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gtf3c6Q9D8P7 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gtf3c6Q9D8P7 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gtf3c6Q9D8P7 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
Gtf3c6Q9D8P7 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
Gtf3c6Q9D8P7 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms