Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Chmp4cQ9D7F7 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chmp4cQ9D7F7 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chmp4cQ9D7F7 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chmp4cQ9D7F7 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chmp4cQ9D7F7 Wnt10b-204ENSMUST00000226655 1807 ntBASIC19.9■□□□□ 0.78
Chmp4cQ9D7F7 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Chmp4cQ9D7F7 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Chmp4cQ9D7F7 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chmp4cQ9D7F7 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chmp4cQ9D7F7 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Chmp4cQ9D7F7 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chmp4cQ9D7F7 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Chmp4cQ9D7F7 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
Chmp4cQ9D7F7 Gm17661-201ENSMUST00000170317 270 ntBASIC19.89■□□□□ 0.77
Chmp4cQ9D7F7 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Chmp4cQ9D7F7 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Chmp4cQ9D7F7 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chmp4cQ9D7F7 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chmp4cQ9D7F7 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chmp4cQ9D7F7 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chmp4cQ9D7F7 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chmp4cQ9D7F7 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chmp4cQ9D7F7 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Chmp4cQ9D7F7 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp4cQ9D7F7 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp4cQ9D7F7 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp4cQ9D7F7 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp4cQ9D7F7 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Chmp4cQ9D7F7 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp4cQ9D7F7 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC19.88■□□□□ 0.77
Chmp4cQ9D7F7 Gm37025-201ENSMUST00000195159 829 ntBASIC19.88■□□□□ 0.77
Chmp4cQ9D7F7 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC19.88■□□□□ 0.77
Chmp4cQ9D7F7 AC154649.1-201ENSMUST00000227392 384 ntBASIC19.88■□□□□ 0.77
Chmp4cQ9D7F7 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp4cQ9D7F7 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp4cQ9D7F7 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp4cQ9D7F7 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp4cQ9D7F7 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Chmp4cQ9D7F7 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp4cQ9D7F7 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp4cQ9D7F7 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp4cQ9D7F7 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp4cQ9D7F7 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp4cQ9D7F7 Gm45203-201ENSMUST00000206384 1831 ntBASIC19.88■□□□□ 0.77
Chmp4cQ9D7F7 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp4cQ9D7F7 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Chmp4cQ9D7F7 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chmp4cQ9D7F7 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chmp4cQ9D7F7 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC19.87■□□□□ 0.77
Chmp4cQ9D7F7 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chmp4cQ9D7F7 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chmp4cQ9D7F7 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Chmp4cQ9D7F7 Gm715-201ENSMUST00000117865 831 ntBASIC19.87■□□□□ 0.77
Chmp4cQ9D7F7 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC19.87■□□□□ 0.77
Chmp4cQ9D7F7 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Chmp4cQ9D7F7 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chmp4cQ9D7F7 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chmp4cQ9D7F7 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Chmp4cQ9D7F7 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chmp4cQ9D7F7 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC19.87■□□□□ 0.77
Chmp4cQ9D7F7 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chmp4cQ9D7F7 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chmp4cQ9D7F7 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Chmp4cQ9D7F7 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chmp4cQ9D7F7 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Chmp4cQ9D7F7 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chmp4cQ9D7F7 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Chmp4cQ9D7F7 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp4cQ9D7F7 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp4cQ9D7F7 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp4cQ9D7F7 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp4cQ9D7F7 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp4cQ9D7F7 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp4cQ9D7F7 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Chmp4cQ9D7F7 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp4cQ9D7F7 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp4cQ9D7F7 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp4cQ9D7F7 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.86■□□□□ 0.77
Chmp4cQ9D7F7 Gm27000-201ENSMUST00000182943 842 ntBASIC19.86■□□□□ 0.77
Chmp4cQ9D7F7 Gm8520-201ENSMUST00000186517 868 ntBASIC19.86■□□□□ 0.77
Chmp4cQ9D7F7 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp4cQ9D7F7 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp4cQ9D7F7 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp4cQ9D7F7 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp4cQ9D7F7 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp4cQ9D7F7 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp4cQ9D7F7 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp4cQ9D7F7 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp4cQ9D7F7 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp4cQ9D7F7 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp4cQ9D7F7 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC19.85■□□□□ 0.77
Chmp4cQ9D7F7 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp4cQ9D7F7 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Chmp4cQ9D7F7 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp4cQ9D7F7 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC19.85■□□□□ 0.77
Chmp4cQ9D7F7 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp4cQ9D7F7 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp4cQ9D7F7 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp4cQ9D7F7 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms