Protein–RNA interactions for Protein: Q9D361

Snrnp48, U11/U12 small nuclear ribonucleoprotein 48 kDa protein, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp48Q9D361 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Snrnp48Q9D361 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Snrnp48Q9D361 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Snrnp48Q9D361 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
Snrnp48Q9D361 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Snrnp48Q9D361 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Snrnp48Q9D361 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Snrnp48Q9D361 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Snrnp48Q9D361 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.59■□□□□ 0.25
Snrnp48Q9D361 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Snrnp48Q9D361 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Snrnp48Q9D361 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Snrnp48Q9D361 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Snrnp48Q9D361 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Snrnp48Q9D361 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Snrnp48Q9D361 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Snrnp48Q9D361 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.59■□□□□ 0.25
Snrnp48Q9D361 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.59■□□□□ 0.25
Snrnp48Q9D361 Gm26039-201ENSMUST00000158152 144 ntBASIC16.59■□□□□ 0.25
Snrnp48Q9D361 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.59■□□□□ 0.25
Snrnp48Q9D361 Gm27389-201ENSMUST00000183622 195 ntBASIC16.59■□□□□ 0.25
Snrnp48Q9D361 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Snrnp48Q9D361 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Snrnp48Q9D361 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Snrnp48Q9D361 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Snrnp48Q9D361 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Snrnp48Q9D361 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Snrnp48Q9D361 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.59■□□□□ 0.25
Snrnp48Q9D361 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Snrnp48Q9D361 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Snrnp48Q9D361 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Snrnp48Q9D361 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.58■□□□□ 0.25
Snrnp48Q9D361 Phf7-203ENSMUST00000226565 1971 ntBASIC16.58■□□□□ 0.25
Snrnp48Q9D361 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Snrnp48Q9D361 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Snrnp48Q9D361 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Snrnp48Q9D361 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.58■□□□□ 0.25
Snrnp48Q9D361 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Snrnp48Q9D361 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Snrnp48Q9D361 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Snrnp48Q9D361 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Snrnp48Q9D361 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Snrnp48Q9D361 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Snrnp48Q9D361 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.58■□□□□ 0.24
Snrnp48Q9D361 Gm44450-201ENSMUST00000199528 114 ntBASIC16.58■□□□□ 0.24
Snrnp48Q9D361 Gm18101-201ENSMUST00000215769 548 ntBASIC16.58■□□□□ 0.24
Snrnp48Q9D361 Gm18032-201ENSMUST00000222541 538 ntBASIC16.58■□□□□ 0.24
Snrnp48Q9D361 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Snrnp48Q9D361 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Snrnp48Q9D361 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Snrnp48Q9D361 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Snrnp48Q9D361 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Snrnp48Q9D361 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Snrnp48Q9D361 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Snrnp48Q9D361 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Snrnp48Q9D361 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Snrnp48Q9D361 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Snrnp48Q9D361 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Snrnp48Q9D361 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Snrnp48Q9D361 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Snrnp48Q9D361 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Snrnp48Q9D361 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Snrnp48Q9D361 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Snrnp48Q9D361 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Snrnp48Q9D361 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Snrnp48Q9D361 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Snrnp48Q9D361 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.57■□□□□ 0.24
Snrnp48Q9D361 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Snrnp48Q9D361 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Snrnp48Q9D361 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Snrnp48Q9D361 Gm9987-201ENSMUST00000069768 567 ntBASIC16.57■□□□□ 0.24
Snrnp48Q9D361 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Snrnp48Q9D361 Gm10566-201ENSMUST00000086739 996 ntBASIC16.57■□□□□ 0.24
Snrnp48Q9D361 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Snrnp48Q9D361 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Snrnp48Q9D361 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Snrnp48Q9D361 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Snrnp48Q9D361 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.57■□□□□ 0.24
Snrnp48Q9D361 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Snrnp48Q9D361 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.57■□□□□ 0.24
Snrnp48Q9D361 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Snrnp48Q9D361 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Snrnp48Q9D361 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Snrnp48Q9D361 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Snrnp48Q9D361 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.56■□□□□ 0.24
Snrnp48Q9D361 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Snrnp48Q9D361 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Snrnp48Q9D361 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Snrnp48Q9D361 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Snrnp48Q9D361 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Snrnp48Q9D361 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Snrnp48Q9D361 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Snrnp48Q9D361 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Snrnp48Q9D361 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Snrnp48Q9D361 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Snrnp48Q9D361 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Snrnp48Q9D361 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Snrnp48Q9D361 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Snrnp48Q9D361 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Snrnp48Q9D361 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms