Protein–RNA interactions for Protein: Q9CZQ6

Raet1e, Retinoic acid early-inducible protein 1-epsilon, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1eQ9CZQ6 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Raet1eQ9CZQ6 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Raet1eQ9CZQ6 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Raet1eQ9CZQ6 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC14.67□□□□□ -0.06
Raet1eQ9CZQ6 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Raet1eQ9CZQ6 AC099934.2-201ENSMUST00000196389 70 ntBASIC14.67□□□□□ -0.06
Raet1eQ9CZQ6 AC156953.1-201ENSMUST00000196953 70 ntBASIC14.67□□□□□ -0.06
Raet1eQ9CZQ6 AC157822.2-201ENSMUST00000200291 70 ntBASIC14.67□□□□□ -0.06
Raet1eQ9CZQ6 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC14.67□□□□□ -0.06
Raet1eQ9CZQ6 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Raet1eQ9CZQ6 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Raet1eQ9CZQ6 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Raet1eQ9CZQ6 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Raet1eQ9CZQ6 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Raet1eQ9CZQ6 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Raet1eQ9CZQ6 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Raet1eQ9CZQ6 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Raet1eQ9CZQ6 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Raet1eQ9CZQ6 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Raet1eQ9CZQ6 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Raet1eQ9CZQ6 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Raet1eQ9CZQ6 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Raet1eQ9CZQ6 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Raet1eQ9CZQ6 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Raet1eQ9CZQ6 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Raet1eQ9CZQ6 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Raet1eQ9CZQ6 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.66□□□□□ -0.06
Raet1eQ9CZQ6 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Raet1eQ9CZQ6 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Raet1eQ9CZQ6 Gm7290-201ENSMUST00000104990 617 ntBASIC14.66□□□□□ -0.06
Raet1eQ9CZQ6 Gm12918-201ENSMUST00000120234 636 ntBASIC14.66□□□□□ -0.06
Raet1eQ9CZQ6 Gm15710-201ENSMUST00000121821 636 ntBASIC14.66□□□□□ -0.06
Raet1eQ9CZQ6 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Raet1eQ9CZQ6 Gm6211-202ENSMUST00000167849 925 ntBASIC14.66□□□□□ -0.06
Raet1eQ9CZQ6 Gm5075-201ENSMUST00000196916 622 ntBASIC14.66□□□□□ -0.06
Raet1eQ9CZQ6 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC14.66□□□□□ -0.06
Raet1eQ9CZQ6 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC14.66□□□□□ -0.06
Raet1eQ9CZQ6 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC14.66□□□□□ -0.06
Raet1eQ9CZQ6 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Raet1eQ9CZQ6 Mtag2-201ENSMUST00000058665 714 ntBASIC14.66□□□□□ -0.06
Raet1eQ9CZQ6 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Raet1eQ9CZQ6 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC14.66□□□□□ -0.06
Raet1eQ9CZQ6 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC14.66□□□□□ -0.06
Raet1eQ9CZQ6 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Raet1eQ9CZQ6 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Raet1eQ9CZQ6 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Raet1eQ9CZQ6 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Raet1eQ9CZQ6 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Raet1eQ9CZQ6 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Raet1eQ9CZQ6 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
Raet1eQ9CZQ6 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Raet1eQ9CZQ6 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Raet1eQ9CZQ6 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Raet1eQ9CZQ6 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Raet1eQ9CZQ6 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Raet1eQ9CZQ6 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Raet1eQ9CZQ6 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
Raet1eQ9CZQ6 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Raet1eQ9CZQ6 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC14.65□□□□□ -0.06
Raet1eQ9CZQ6 Gm5408-201ENSMUST00000197998 747 ntBASIC14.65□□□□□ -0.06
Raet1eQ9CZQ6 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC14.65□□□□□ -0.06
Raet1eQ9CZQ6 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Raet1eQ9CZQ6 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Raet1eQ9CZQ6 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Raet1eQ9CZQ6 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Raet1eQ9CZQ6 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Raet1eQ9CZQ6 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Raet1eQ9CZQ6 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Raet1eQ9CZQ6 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Raet1eQ9CZQ6 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Raet1eQ9CZQ6 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Raet1eQ9CZQ6 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Raet1eQ9CZQ6 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Raet1eQ9CZQ6 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Raet1eQ9CZQ6 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Raet1eQ9CZQ6 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Raet1eQ9CZQ6 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Raet1eQ9CZQ6 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Raet1eQ9CZQ6 Asic1-205ENSMUST00000228185 1818 ntBASIC14.64□□□□□ -0.07
Raet1eQ9CZQ6 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Raet1eQ9CZQ6 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Raet1eQ9CZQ6 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Raet1eQ9CZQ6 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Raet1eQ9CZQ6 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Raet1eQ9CZQ6 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Raet1eQ9CZQ6 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
Raet1eQ9CZQ6 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC14.64□□□□□ -0.07
Raet1eQ9CZQ6 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Raet1eQ9CZQ6 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Raet1eQ9CZQ6 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Raet1eQ9CZQ6 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Raet1eQ9CZQ6 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Raet1eQ9CZQ6 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Raet1eQ9CZQ6 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Raet1eQ9CZQ6 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Raet1eQ9CZQ6 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Raet1eQ9CZQ6 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Raet1eQ9CZQ6 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Raet1eQ9CZQ6 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Raet1eQ9CZQ6 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms