Protein–RNA interactions for Protein: Q9CSV6

Sft2d3, Vesicle transport protein SFT2C, mousemouse

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sft2d3Q9CSV6 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sft2d3Q9CSV6 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sft2d3Q9CSV6 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sft2d3Q9CSV6 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Sft2d3Q9CSV6 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sft2d3Q9CSV6 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sft2d3Q9CSV6 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sft2d3Q9CSV6 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sft2d3Q9CSV6 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sft2d3Q9CSV6 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC14.17□□□□□ -0.14
Sft2d3Q9CSV6 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC14.17□□□□□ -0.14
Sft2d3Q9CSV6 Gm22697-201ENSMUST00000175194 63 ntBASIC14.17□□□□□ -0.14
Sft2d3Q9CSV6 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Sft2d3Q9CSV6 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC14.17□□□□□ -0.14
Sft2d3Q9CSV6 Il3ra-202ENSMUST00000223589 738 ntBASIC14.17□□□□□ -0.14
Sft2d3Q9CSV6 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sft2d3Q9CSV6 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sft2d3Q9CSV6 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sft2d3Q9CSV6 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sft2d3Q9CSV6 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC14.17□□□□□ -0.14
Sft2d3Q9CSV6 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sft2d3Q9CSV6 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.17□□□□□ -0.14
Sft2d3Q9CSV6 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Sft2d3Q9CSV6 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sft2d3Q9CSV6 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sft2d3Q9CSV6 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sft2d3Q9CSV6 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Sft2d3Q9CSV6 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sft2d3Q9CSV6 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sft2d3Q9CSV6 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sft2d3Q9CSV6 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Sft2d3Q9CSV6 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC14.16□□□□□ -0.14
Sft2d3Q9CSV6 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sft2d3Q9CSV6 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC14.16□□□□□ -0.14
Sft2d3Q9CSV6 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sft2d3Q9CSV6 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sft2d3Q9CSV6 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sft2d3Q9CSV6 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Sft2d3Q9CSV6 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sft2d3Q9CSV6 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sft2d3Q9CSV6 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sft2d3Q9CSV6 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sft2d3Q9CSV6 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC14.16□□□□□ -0.14
Sft2d3Q9CSV6 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sft2d3Q9CSV6 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sft2d3Q9CSV6 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sft2d3Q9CSV6 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sft2d3Q9CSV6 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sft2d3Q9CSV6 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sft2d3Q9CSV6 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sft2d3Q9CSV6 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sft2d3Q9CSV6 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.14
Sft2d3Q9CSV6 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Sft2d3Q9CSV6 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sft2d3Q9CSV6 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sft2d3Q9CSV6 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sft2d3Q9CSV6 Gm23634-201ENSMUST00000175071 91 ntBASIC14.15□□□□□ -0.14
Sft2d3Q9CSV6 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sft2d3Q9CSV6 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC14.15□□□□□ -0.14
Sft2d3Q9CSV6 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.15□□□□□ -0.14
Sft2d3Q9CSV6 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC14.15□□□□□ -0.14
Sft2d3Q9CSV6 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sft2d3Q9CSV6 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sft2d3Q9CSV6 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sft2d3Q9CSV6 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sft2d3Q9CSV6 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sft2d3Q9CSV6 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sft2d3Q9CSV6 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sft2d3Q9CSV6 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sft2d3Q9CSV6 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sft2d3Q9CSV6 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sft2d3Q9CSV6 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Sft2d3Q9CSV6 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sft2d3Q9CSV6 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sft2d3Q9CSV6 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Sft2d3Q9CSV6 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.15
Sft2d3Q9CSV6 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Sft2d3Q9CSV6 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sft2d3Q9CSV6 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Sft2d3Q9CSV6 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Sft2d3Q9CSV6 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sft2d3Q9CSV6 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sft2d3Q9CSV6 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC14.14□□□□□ -0.15
Sft2d3Q9CSV6 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sft2d3Q9CSV6 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sft2d3Q9CSV6 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC14.14□□□□□ -0.15
Sft2d3Q9CSV6 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Sft2d3Q9CSV6 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sft2d3Q9CSV6 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sft2d3Q9CSV6 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.14□□□□□ -0.15
Sft2d3Q9CSV6 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sft2d3Q9CSV6 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sft2d3Q9CSV6 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sft2d3Q9CSV6 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sft2d3Q9CSV6 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sft2d3Q9CSV6 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sft2d3Q9CSV6 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sft2d3Q9CSV6 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sft2d3Q9CSV6 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sft2d3Q9CSV6 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms