Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retreg3Q9CQV4 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retreg3Q9CQV4 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
Retreg3Q9CQV4 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Retreg3Q9CQV4 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retreg3Q9CQV4 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Retreg3Q9CQV4 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retreg3Q9CQV4 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Retreg3Q9CQV4 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retreg3Q9CQV4 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retreg3Q9CQV4 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retreg3Q9CQV4 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Retreg3Q9CQV4 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Retreg3Q9CQV4 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retreg3Q9CQV4 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retreg3Q9CQV4 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retreg3Q9CQV4 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retreg3Q9CQV4 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retreg3Q9CQV4 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retreg3Q9CQV4 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retreg3Q9CQV4 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Retreg3Q9CQV4 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Retreg3Q9CQV4 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.71■□□□□ 0.27
Retreg3Q9CQV4 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.71■□□□□ 0.27
Retreg3Q9CQV4 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Retreg3Q9CQV4 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.71■□□□□ 0.27
Retreg3Q9CQV4 Gm43416-201ENSMUST00000201916 1015 ntBASIC16.71■□□□□ 0.27
Retreg3Q9CQV4 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.71■□□□□ 0.27
Retreg3Q9CQV4 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retreg3Q9CQV4 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retreg3Q9CQV4 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retreg3Q9CQV4 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retreg3Q9CQV4 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retreg3Q9CQV4 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retreg3Q9CQV4 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Retreg3Q9CQV4 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Retreg3Q9CQV4 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.26
Retreg3Q9CQV4 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Retreg3Q9CQV4 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retreg3Q9CQV4 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retreg3Q9CQV4 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Retreg3Q9CQV4 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.7■□□□□ 0.26
Retreg3Q9CQV4 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retreg3Q9CQV4 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Retreg3Q9CQV4 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retreg3Q9CQV4 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Retreg3Q9CQV4 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retreg3Q9CQV4 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retreg3Q9CQV4 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Retreg3Q9CQV4 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Retreg3Q9CQV4 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.7■□□□□ 0.26
Retreg3Q9CQV4 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC16.7■□□□□ 0.26
Retreg3Q9CQV4 Gm18115-201ENSMUST00000221209 621 ntBASIC16.7■□□□□ 0.26
Retreg3Q9CQV4 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retreg3Q9CQV4 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retreg3Q9CQV4 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retreg3Q9CQV4 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Retreg3Q9CQV4 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retreg3Q9CQV4 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Retreg3Q9CQV4 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retreg3Q9CQV4 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retreg3Q9CQV4 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Retreg3Q9CQV4 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retreg3Q9CQV4 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retreg3Q9CQV4 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Retreg3Q9CQV4 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retreg3Q9CQV4 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retreg3Q9CQV4 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Retreg3Q9CQV4 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retreg3Q9CQV4 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retreg3Q9CQV4 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Retreg3Q9CQV4 Gm11336-201ENSMUST00000118168 334 ntBASIC16.69■□□□□ 0.26
Retreg3Q9CQV4 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Retreg3Q9CQV4 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Retreg3Q9CQV4 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retreg3Q9CQV4 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retreg3Q9CQV4 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retreg3Q9CQV4 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retreg3Q9CQV4 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retreg3Q9CQV4 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retreg3Q9CQV4 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retreg3Q9CQV4 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retreg3Q9CQV4 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Retreg3Q9CQV4 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Retreg3Q9CQV4 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retreg3Q9CQV4 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retreg3Q9CQV4 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retreg3Q9CQV4 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Retreg3Q9CQV4 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retreg3Q9CQV4 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retreg3Q9CQV4 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC16.68■□□□□ 0.26
Retreg3Q9CQV4 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retreg3Q9CQV4 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retreg3Q9CQV4 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Retreg3Q9CQV4 Gm9103-201ENSMUST00000119371 405 ntBASIC16.68■□□□□ 0.26
Retreg3Q9CQV4 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Retreg3Q9CQV4 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.68■□□□□ 0.26
Retreg3Q9CQV4 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retreg3Q9CQV4 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retreg3Q9CQV4 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms