Protein–RNA interactions for Protein: Q9CQ48

Nudcd2, NudC domain-containing protein 2, mousemouse

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd2Q9CQ48 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nudcd2Q9CQ48 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Nudcd2Q9CQ48 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nudcd2Q9CQ48 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Nudcd2Q9CQ48 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nudcd2Q9CQ48 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Nudcd2Q9CQ48 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nudcd2Q9CQ48 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nudcd2Q9CQ48 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nudcd2Q9CQ48 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nudcd2Q9CQ48 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nudcd2Q9CQ48 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nudcd2Q9CQ48 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nudcd2Q9CQ48 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Nudcd2Q9CQ48 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC14.31□□□□□ -0.12
Nudcd2Q9CQ48 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nudcd2Q9CQ48 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC14.31□□□□□ -0.12
Nudcd2Q9CQ48 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nudcd2Q9CQ48 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Nudcd2Q9CQ48 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Nudcd2Q9CQ48 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nudcd2Q9CQ48 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nudcd2Q9CQ48 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Nudcd2Q9CQ48 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.31□□□□□ -0.12
Nudcd2Q9CQ48 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nudcd2Q9CQ48 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Nudcd2Q9CQ48 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nudcd2Q9CQ48 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Nudcd2Q9CQ48 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nudcd2Q9CQ48 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nudcd2Q9CQ48 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Nudcd2Q9CQ48 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nudcd2Q9CQ48 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nudcd2Q9CQ48 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nudcd2Q9CQ48 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Nudcd2Q9CQ48 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nudcd2Q9CQ48 AC166341.7-201ENSMUST00000221698 126 ntBASIC14.3□□□□□ -0.12
Nudcd2Q9CQ48 AC163280.1-201ENSMUST00000228194 1100 ntBASIC14.3□□□□□ -0.12
Nudcd2Q9CQ48 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nudcd2Q9CQ48 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nudcd2Q9CQ48 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.3□□□□□ -0.12
Nudcd2Q9CQ48 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Nudcd2Q9CQ48 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Nudcd2Q9CQ48 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Nudcd2Q9CQ48 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Nudcd2Q9CQ48 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nudcd2Q9CQ48 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nudcd2Q9CQ48 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nudcd2Q9CQ48 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nudcd2Q9CQ48 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nudcd2Q9CQ48 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nudcd2Q9CQ48 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Nudcd2Q9CQ48 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nudcd2Q9CQ48 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nudcd2Q9CQ48 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nudcd2Q9CQ48 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC14.29□□□□□ -0.12
Nudcd2Q9CQ48 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC14.29□□□□□ -0.12
Nudcd2Q9CQ48 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.29□□□□□ -0.12
Nudcd2Q9CQ48 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nudcd2Q9CQ48 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nudcd2Q9CQ48 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.29□□□□□ -0.12
Nudcd2Q9CQ48 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nudcd2Q9CQ48 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC14.29□□□□□ -0.12
Nudcd2Q9CQ48 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nudcd2Q9CQ48 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Nudcd2Q9CQ48 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Nudcd2Q9CQ48 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Nudcd2Q9CQ48 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nudcd2Q9CQ48 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nudcd2Q9CQ48 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Nudcd2Q9CQ48 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC14.29□□□□□ -0.12
Nudcd2Q9CQ48 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nudcd2Q9CQ48 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nudcd2Q9CQ48 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Nudcd2Q9CQ48 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Nudcd2Q9CQ48 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nudcd2Q9CQ48 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.29□□□□□ -0.12
Nudcd2Q9CQ48 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nudcd2Q9CQ48 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Nudcd2Q9CQ48 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nudcd2Q9CQ48 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Nudcd2Q9CQ48 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nudcd2Q9CQ48 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nudcd2Q9CQ48 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Nudcd2Q9CQ48 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC14.28□□□□□ -0.12
Nudcd2Q9CQ48 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nudcd2Q9CQ48 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC14.28□□□□□ -0.12
Nudcd2Q9CQ48 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nudcd2Q9CQ48 Gm4974-201ENSMUST00000209974 875 ntBASIC14.28□□□□□ -0.12
Nudcd2Q9CQ48 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nudcd2Q9CQ48 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nudcd2Q9CQ48 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nudcd2Q9CQ48 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nudcd2Q9CQ48 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nudcd2Q9CQ48 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Nudcd2Q9CQ48 Dio3-201ENSMUST00000097228 1449 ntBASIC14.28□□□□□ -0.12
Nudcd2Q9CQ48 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nudcd2Q9CQ48 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nudcd2Q9CQ48 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nudcd2Q9CQ48 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms