Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXC2Q99958 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXC2Q99958 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
FOXC2Q99958 LINC01311-201ENST00000565162 1445 ntBASIC16.37■□□□□ 0.21
FOXC2Q99958 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
FOXC2Q99958 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXC2Q99958 AC018553.1-201ENST00000616682 1458 ntBASIC16.37■□□□□ 0.21
FOXC2Q99958 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXC2Q99958 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
FOXC2Q99958 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.37■□□□□ 0.21
FOXC2Q99958 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXC2Q99958 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
FOXC2Q99958 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXC2Q99958 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.37■□□□□ 0.21
FOXC2Q99958 CKBP1-201ENST00000565489 1086 ntBASIC16.37■□□□□ 0.21
FOXC2Q99958 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.37■□□□□ 0.21
FOXC2Q99958 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
FOXC2Q99958 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.37■□□□□ 0.21
FOXC2Q99958 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXC2Q99958 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC16.37■□□□□ 0.21
FOXC2Q99958 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXC2Q99958 DYM-203ENST00000442713 2147 ntTSL 2 BASIC16.37■□□□□ 0.21
FOXC2Q99958 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXC2Q99958 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.37■□□□□ 0.21
FOXC2Q99958 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXC2Q99958 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
FOXC2Q99958 TERT-206ENST00000508104 2486 ntTSL 5 BASIC16.37■□□□□ 0.21
FOXC2Q99958 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXC2Q99958 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXC2Q99958 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
FOXC2Q99958 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXC2Q99958 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXC2Q99958 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
FOXC2Q99958 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXC2Q99958 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC16.36■□□□□ 0.21
FOXC2Q99958 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXC2Q99958 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXC2Q99958 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC16.36■□□□□ 0.21
FOXC2Q99958 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC16.36■□□□□ 0.21
FOXC2Q99958 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
FOXC2Q99958 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC16.36■□□□□ 0.21
FOXC2Q99958 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
FOXC2Q99958 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
FOXC2Q99958 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.36■□□□□ 0.21
FOXC2Q99958 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
FOXC2Q99958 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.36■□□□□ 0.21
FOXC2Q99958 AL845331.1-201ENST00000424978 1190 ntBASIC16.36■□□□□ 0.21
FOXC2Q99958 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.36■□□□□ 0.21
FOXC2Q99958 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.36■□□□□ 0.21
FOXC2Q99958 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.36■□□□□ 0.21
FOXC2Q99958 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.36■□□□□ 0.21
FOXC2Q99958 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
FOXC2Q99958 NEK4P2-201ENST00000580004 1012 ntBASIC16.36■□□□□ 0.21
FOXC2Q99958 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXC2Q99958 HYMAI.1-201ENST00000620949 238 ntBASIC16.36■□□□□ 0.21
FOXC2Q99958 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
FOXC2Q99958 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.36■□□□□ 0.21
FOXC2Q99958 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXC2Q99958 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXC2Q99958 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC16.36■□□□□ 0.21
FOXC2Q99958 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXC2Q99958 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXC2Q99958 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.36■□□□□ 0.21
FOXC2Q99958 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
FOXC2Q99958 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXC2Q99958 KRT8P45-201ENST00000414328 1447 ntBASIC16.36■□□□□ 0.21
FOXC2Q99958 KRT16P6-202ENST00000425692 1426 ntBASIC16.36■□□□□ 0.21
FOXC2Q99958 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC16.36■□□□□ 0.21
FOXC2Q99958 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
FOXC2Q99958 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
FOXC2Q99958 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC16.35■□□□□ 0.21
FOXC2Q99958 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
FOXC2Q99958 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
FOXC2Q99958 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
FOXC2Q99958 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
FOXC2Q99958 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
FOXC2Q99958 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
FOXC2Q99958 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
FOXC2Q99958 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.35■□□□□ 0.21
FOXC2Q99958 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
FOXC2Q99958 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.35■□□□□ 0.21
FOXC2Q99958 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16.35■□□□□ 0.21
FOXC2Q99958 Z85996.1-201ENST00000494644 937 ntBASIC16.35■□□□□ 0.21
FOXC2Q99958 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.35■□□□□ 0.21
FOXC2Q99958 AP003041.3-201ENST00000527151 707 ntBASIC16.35■□□□□ 0.21
FOXC2Q99958 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
FOXC2Q99958 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.35■□□□□ 0.21
FOXC2Q99958 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.35■□□□□ 0.21
FOXC2Q99958 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
FOXC2Q99958 AC092329.2-201ENST00000598402 547 ntBASIC16.35■□□□□ 0.21
FOXC2Q99958 AC092119.3-201ENST00000612618 583 ntBASIC16.35■□□□□ 0.21
FOXC2Q99958 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC16.35■□□□□ 0.21
FOXC2Q99958 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
FOXC2Q99958 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
FOXC2Q99958 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC16.35■□□□□ 0.21
FOXC2Q99958 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.35■□□□□ 0.21
FOXC2Q99958 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
FOXC2Q99958 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC16.35■□□□□ 0.21
FOXC2Q99958 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
FOXC2Q99958 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms