Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TTC28Q96AY4 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC19.83■□□□□ 0.77
TTC28Q96AY4 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TTC28Q96AY4 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.83■□□□□ 0.77
TTC28Q96AY4 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.83■□□□□ 0.76
TTC28Q96AY4 TUBB8P6-201ENST00000436895 1288 ntBASIC19.83■□□□□ 0.76
TTC28Q96AY4 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC19.83■□□□□ 0.76
TTC28Q96AY4 DHDH-204ENST00000523250 634 ntTSL 5 BASIC19.83■□□□□ 0.76
TTC28Q96AY4 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TTC28Q96AY4 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TTC28Q96AY4 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TTC28Q96AY4 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
TTC28Q96AY4 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.83■□□□□ 0.76
TTC28Q96AY4 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.82■□□□□ 0.76
TTC28Q96AY4 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.82■□□□□ 0.76
TTC28Q96AY4 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC19.82■□□□□ 0.76
TTC28Q96AY4 AC092364.2-202ENST00000597012 1073 ntBASIC19.82■□□□□ 0.76
TTC28Q96AY4 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TTC28Q96AY4 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TTC28Q96AY4 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC19.82■□□□□ 0.76
TTC28Q96AY4 RPS8P6-201ENST00000426177 609 ntBASIC19.82■□□□□ 0.76
TTC28Q96AY4 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.82■□□□□ 0.76
TTC28Q96AY4 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19.82■□□□□ 0.76
TTC28Q96AY4 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC19.82■□□□□ 0.76
TTC28Q96AY4 SART3-203ENST00000546611 1184 ntBASIC19.82■□□□□ 0.76
TTC28Q96AY4 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
TTC28Q96AY4 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.82■□□□□ 0.76
TTC28Q96AY4 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TTC28Q96AY4 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TTC28Q96AY4 LBH-204ENST00000406087 559 ntTSL 4 BASIC19.81■□□□□ 0.76
TTC28Q96AY4 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TTC28Q96AY4 AC074051.2-201ENST00000565115 352 ntBASIC19.81■□□□□ 0.76
TTC28Q96AY4 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
TTC28Q96AY4 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.81■□□□□ 0.76
TTC28Q96AY4 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TTC28Q96AY4 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TTC28Q96AY4 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC19.81■□□□□ 0.76
TTC28Q96AY4 DNAJB3-202ENST00000449667 1266 ntBASIC19.81■□□□□ 0.76
TTC28Q96AY4 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
TTC28Q96AY4 ECEL1P1-201ENST00000373592 1742 ntBASIC19.81■□□□□ 0.76
TTC28Q96AY4 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
TTC28Q96AY4 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TTC28Q96AY4 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TTC28Q96AY4 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TTC28Q96AY4 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
TTC28Q96AY4 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
TTC28Q96AY4 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.81■□□□□ 0.76
TTC28Q96AY4 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC19.8■□□□□ 0.76
TTC28Q96AY4 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
TTC28Q96AY4 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TTC28Q96AY4 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TTC28Q96AY4 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
TTC28Q96AY4 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TTC28Q96AY4 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TTC28Q96AY4 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC19.8■□□□□ 0.76
TTC28Q96AY4 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TTC28Q96AY4 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.8■□□□□ 0.76
TTC28Q96AY4 KRT8P20-201ENST00000423953 1409 ntBASIC19.8■□□□□ 0.76
TTC28Q96AY4 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.8■□□□□ 0.76
TTC28Q96AY4 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
TTC28Q96AY4 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TTC28Q96AY4 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TTC28Q96AY4 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TTC28Q96AY4 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.8■□□□□ 0.76
TTC28Q96AY4 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TTC28Q96AY4 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TTC28Q96AY4 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.8■□□□□ 0.76
TTC28Q96AY4 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.79■□□□□ 0.76
TTC28Q96AY4 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TTC28Q96AY4 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.79■□□□□ 0.76
TTC28Q96AY4 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TTC28Q96AY4 AC018712.1-201ENST00000455767 687 ntBASIC19.79■□□□□ 0.76
TTC28Q96AY4 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC19.79■□□□□ 0.76
TTC28Q96AY4 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC19.79■□□□□ 0.76
TTC28Q96AY4 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.79■□□□□ 0.76
TTC28Q96AY4 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TTC28Q96AY4 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
TTC28Q96AY4 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.79■□□□□ 0.76
TTC28Q96AY4 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.79■□□□□ 0.76
TTC28Q96AY4 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TTC28Q96AY4 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.79■□□□□ 0.76
TTC28Q96AY4 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TTC28Q96AY4 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.79■□□□□ 0.76
TTC28Q96AY4 FICD-205ENST00000552758 603 ntTSL 2 BASIC19.79■□□□□ 0.76
TTC28Q96AY4 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TTC28Q96AY4 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC19.79■□□□□ 0.76
TTC28Q96AY4 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TTC28Q96AY4 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TTC28Q96AY4 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.79■□□□□ 0.76
TTC28Q96AY4 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC19.78■□□□□ 0.76
TTC28Q96AY4 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
TTC28Q96AY4 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TTC28Q96AY4 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TTC28Q96AY4 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.78■□□□□ 0.76
TTC28Q96AY4 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.78■□□□□ 0.76
TTC28Q96AY4 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.78■□□□□ 0.76
TTC28Q96AY4 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TTC28Q96AY4 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TTC28Q96AY4 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
TTC28Q96AY4 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms