Protein–RNA interactions for Protein: Q91Y14

Pcdha6, Pcdha6 protein, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha6Q91Y14 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha6Q91Y14 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha6Q91Y14 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha6Q91Y14 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.62■□□□□ 0.25
Pcdha6Q91Y14 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.62■□□□□ 0.25
Pcdha6Q91Y14 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.62■□□□□ 0.25
Pcdha6Q91Y14 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.62■□□□□ 0.25
Pcdha6Q91Y14 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
Pcdha6Q91Y14 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha6Q91Y14 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha6Q91Y14 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha6Q91Y14 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha6Q91Y14 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha6Q91Y14 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha6Q91Y14 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha6Q91Y14 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha6Q91Y14 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha6Q91Y14 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha6Q91Y14 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha6Q91Y14 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Pcdha6Q91Y14 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha6Q91Y14 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha6Q91Y14 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha6Q91Y14 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha6Q91Y14 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Pcdha6Q91Y14 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha6Q91Y14 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha6Q91Y14 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Pcdha6Q91Y14 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.62■□□□□ 0.25
Pcdha6Q91Y14 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha6Q91Y14 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha6Q91Y14 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha6Q91Y14 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha6Q91Y14 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.61■□□□□ 0.25
Pcdha6Q91Y14 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha6Q91Y14 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha6Q91Y14 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.61■□□□□ 0.25
Pcdha6Q91Y14 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha6Q91Y14 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha6Q91Y14 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha6Q91Y14 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha6Q91Y14 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Pcdha6Q91Y14 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha6Q91Y14 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha6Q91Y14 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.61■□□□□ 0.25
Pcdha6Q91Y14 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha6Q91Y14 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.6■□□□□ 0.25
Pcdha6Q91Y14 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha6Q91Y14 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Pcdha6Q91Y14 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha6Q91Y14 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha6Q91Y14 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha6Q91Y14 Gm27463-201ENSMUST00000183569 57 ntBASIC16.6■□□□□ 0.25
Pcdha6Q91Y14 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.6■□□□□ 0.25
Pcdha6Q91Y14 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.6■□□□□ 0.25
Pcdha6Q91Y14 Gm5417-201ENSMUST00000079706 384 ntBASIC16.6■□□□□ 0.25
Pcdha6Q91Y14 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.6■□□□□ 0.25
Pcdha6Q91Y14 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha6Q91Y14 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha6Q91Y14 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha6Q91Y14 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Pcdha6Q91Y14 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha6Q91Y14 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.6■□□□□ 0.25
Pcdha6Q91Y14 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha6Q91Y14 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha6Q91Y14 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha6Q91Y14 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha6Q91Y14 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha6Q91Y14 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha6Q91Y14 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha6Q91Y14 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Pcdha6Q91Y14 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.59■□□□□ 0.25
Pcdha6Q91Y14 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha6Q91Y14 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha6Q91Y14 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha6Q91Y14 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
Pcdha6Q91Y14 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha6Q91Y14 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha6Q91Y14 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha6Q91Y14 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha6Q91Y14 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha6Q91Y14 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Pcdha6Q91Y14 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Pcdha6Q91Y14 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdha6Q91Y14 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdha6Q91Y14 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdha6Q91Y14 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Pcdha6Q91Y14 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.58■□□□□ 0.24
Pcdha6Q91Y14 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdha6Q91Y14 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
Pcdha6Q91Y14 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.58■□□□□ 0.24
Pcdha6Q91Y14 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.58■□□□□ 0.24
Pcdha6Q91Y14 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.58■□□□□ 0.24
Pcdha6Q91Y14 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdha6Q91Y14 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdha6Q91Y14 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdha6Q91Y14 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdha6Q91Y14 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdha6Q91Y14 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Pcdha6Q91Y14 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms