Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb3Q91XZ7 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb3Q91XZ7 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb3Q91XZ7 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Pcdhb3Q91XZ7 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb3Q91XZ7 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb3Q91XZ7 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.65■□□□□ 0.26
Pcdhb3Q91XZ7 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb3Q91XZ7 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Pcdhb3Q91XZ7 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.65■□□□□ 0.26
Pcdhb3Q91XZ7 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb3Q91XZ7 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb3Q91XZ7 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb3Q91XZ7 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb3Q91XZ7 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb3Q91XZ7 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Pcdhb3Q91XZ7 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb3Q91XZ7 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb3Q91XZ7 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb3Q91XZ7 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb3Q91XZ7 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
Pcdhb3Q91XZ7 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb3Q91XZ7 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb3Q91XZ7 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb3Q91XZ7 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.64■□□□□ 0.25
Pcdhb3Q91XZ7 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb3Q91XZ7 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb3Q91XZ7 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.64■□□□□ 0.25
Pcdhb3Q91XZ7 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.64■□□□□ 0.25
Pcdhb3Q91XZ7 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.64■□□□□ 0.25
Pcdhb3Q91XZ7 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb3Q91XZ7 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb3Q91XZ7 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb3Q91XZ7 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb3Q91XZ7 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb3Q91XZ7 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb3Q91XZ7 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb3Q91XZ7 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
Pcdhb3Q91XZ7 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.64■□□□□ 0.25
Pcdhb3Q91XZ7 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb3Q91XZ7 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb3Q91XZ7 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb3Q91XZ7 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb3Q91XZ7 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb3Q91XZ7 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb3Q91XZ7 Gm11249-201ENSMUST00000117071 859 ntBASIC16.63■□□□□ 0.25
Pcdhb3Q91XZ7 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.63■□□□□ 0.25
Pcdhb3Q91XZ7 Gm18666-201ENSMUST00000190039 958 ntBASIC16.63■□□□□ 0.25
Pcdhb3Q91XZ7 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.63■□□□□ 0.25
Pcdhb3Q91XZ7 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb3Q91XZ7 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb3Q91XZ7 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb3Q91XZ7 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.63■□□□□ 0.25
Pcdhb3Q91XZ7 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb3Q91XZ7 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb3Q91XZ7 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb3Q91XZ7 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb3Q91XZ7 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb3Q91XZ7 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb3Q91XZ7 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb3Q91XZ7 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb3Q91XZ7 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Pcdhb3Q91XZ7 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb3Q91XZ7 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Pcdhb3Q91XZ7 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb3Q91XZ7 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Pcdhb3Q91XZ7 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.62■□□□□ 0.25
Pcdhb3Q91XZ7 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb3Q91XZ7 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb3Q91XZ7 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb3Q91XZ7 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb3Q91XZ7 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb3Q91XZ7 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb3Q91XZ7 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb3Q91XZ7 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb3Q91XZ7 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Pcdhb3Q91XZ7 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb3Q91XZ7 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Pcdhb3Q91XZ7 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
Pcdhb3Q91XZ7 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb3Q91XZ7 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb3Q91XZ7 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb3Q91XZ7 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.61■□□□□ 0.25
Pcdhb3Q91XZ7 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.61■□□□□ 0.25
Pcdhb3Q91XZ7 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Pcdhb3Q91XZ7 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb3Q91XZ7 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb3Q91XZ7 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb3Q91XZ7 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb3Q91XZ7 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb3Q91XZ7 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.61■□□□□ 0.25
Pcdhb3Q91XZ7 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb3Q91XZ7 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb3Q91XZ7 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb3Q91XZ7 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb3Q91XZ7 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
Pcdhb3Q91XZ7 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb3Q91XZ7 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb3Q91XZ7 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb3Q91XZ7 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms