Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb4Q91XZ6 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.52■□□□□ 0.23
Pcdhb4Q91XZ6 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhb4Q91XZ6 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhb4Q91XZ6 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhb4Q91XZ6 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Pcdhb4Q91XZ6 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Pcdhb4Q91XZ6 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhb4Q91XZ6 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb4Q91XZ6 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb4Q91XZ6 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb4Q91XZ6 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Pcdhb4Q91XZ6 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Pcdhb4Q91XZ6 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb4Q91XZ6 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb4Q91XZ6 Gm22240-201ENSMUST00000175225 82 ntBASIC16.51■□□□□ 0.23
Pcdhb4Q91XZ6 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb4Q91XZ6 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb4Q91XZ6 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb4Q91XZ6 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Pcdhb4Q91XZ6 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
Pcdhb4Q91XZ6 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb4Q91XZ6 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb4Q91XZ6 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb4Q91XZ6 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Pcdhb4Q91XZ6 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb4Q91XZ6 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb4Q91XZ6 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb4Q91XZ6 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb4Q91XZ6 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb4Q91XZ6 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb4Q91XZ6 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Pcdhb4Q91XZ6 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb4Q91XZ6 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb4Q91XZ6 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Pcdhb4Q91XZ6 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb4Q91XZ6 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb4Q91XZ6 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb4Q91XZ6 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb4Q91XZ6 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb4Q91XZ6 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.5■□□□□ 0.23
Pcdhb4Q91XZ6 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb4Q91XZ6 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb4Q91XZ6 Gm715-201ENSMUST00000117865 831 ntBASIC16.5■□□□□ 0.23
Pcdhb4Q91XZ6 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.5■□□□□ 0.23
Pcdhb4Q91XZ6 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb4Q91XZ6 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.5■□□□□ 0.23
Pcdhb4Q91XZ6 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.5■□□□□ 0.23
Pcdhb4Q91XZ6 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.5■□□□□ 0.23
Pcdhb4Q91XZ6 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb4Q91XZ6 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb4Q91XZ6 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Pcdhb4Q91XZ6 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb4Q91XZ6 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb4Q91XZ6 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb4Q91XZ6 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb4Q91XZ6 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb4Q91XZ6 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb4Q91XZ6 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb4Q91XZ6 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb4Q91XZ6 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb4Q91XZ6 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb4Q91XZ6 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb4Q91XZ6 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.49■□□□□ 0.23
Pcdhb4Q91XZ6 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb4Q91XZ6 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb4Q91XZ6 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb4Q91XZ6 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb4Q91XZ6 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
Pcdhb4Q91XZ6 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.49■□□□□ 0.23
Pcdhb4Q91XZ6 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb4Q91XZ6 Gm27011-201ENSMUST00000182352 972 ntBASIC16.49■□□□□ 0.23
Pcdhb4Q91XZ6 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.49■□□□□ 0.23
Pcdhb4Q91XZ6 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.49■□□□□ 0.23
Pcdhb4Q91XZ6 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb4Q91XZ6 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb4Q91XZ6 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
Pcdhb4Q91XZ6 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb4Q91XZ6 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb4Q91XZ6 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb4Q91XZ6 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb4Q91XZ6 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb4Q91XZ6 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb4Q91XZ6 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb4Q91XZ6 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb4Q91XZ6 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb4Q91XZ6 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb4Q91XZ6 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.48■□□□□ 0.23
Pcdhb4Q91XZ6 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb4Q91XZ6 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb4Q91XZ6 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb4Q91XZ6 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb4Q91XZ6 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb4Q91XZ6 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.48■□□□□ 0.23
Pcdhb4Q91XZ6 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb4Q91XZ6 Il3ra-202ENSMUST00000223589 738 ntBASIC16.48■□□□□ 0.23
Pcdhb4Q91XZ6 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.48■□□□□ 0.23
Pcdhb4Q91XZ6 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb4Q91XZ6 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb4Q91XZ6 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms