Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.77■□□□□ 0.11
Ubqln1Q8R317 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ubqln1Q8R317 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ubqln1Q8R317 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ubqln1Q8R317 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ubqln1Q8R317 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Ubqln1Q8R317 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ubqln1Q8R317 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ubqln1Q8R317 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ubqln1Q8R317 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Ubqln1Q8R317 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ubqln1Q8R317 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ubqln1Q8R317 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Ubqln1Q8R317 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC15.76■□□□□ 0.11
Ubqln1Q8R317 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ubqln1Q8R317 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ubqln1Q8R317 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
Ubqln1Q8R317 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ubqln1Q8R317 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ubqln1Q8R317 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ubqln1Q8R317 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ubqln1Q8R317 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ubqln1Q8R317 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ubqln1Q8R317 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ubqln1Q8R317 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ubqln1Q8R317 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ubqln1Q8R317 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ubqln1Q8R317 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC15.75■□□□□ 0.11
Ubqln1Q8R317 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ubqln1Q8R317 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ubqln1Q8R317 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.75■□□□□ 0.11
Ubqln1Q8R317 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ubqln1Q8R317 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ubqln1Q8R317 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ubqln1Q8R317 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ubqln1Q8R317 Gm6433-201ENSMUST00000118634 875 ntBASIC15.75■□□□□ 0.11
Ubqln1Q8R317 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC15.75■□□□□ 0.11
Ubqln1Q8R317 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ubqln1Q8R317 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ubqln1Q8R317 Gm7889-201ENSMUST00000185591 958 ntBASIC15.75■□□□□ 0.11
Ubqln1Q8R317 Gm45058-201ENSMUST00000205810 766 ntBASIC15.75■□□□□ 0.11
Ubqln1Q8R317 Gm18959-201ENSMUST00000208954 655 ntBASIC15.75■□□□□ 0.11
Ubqln1Q8R317 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ubqln1Q8R317 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ubqln1Q8R317 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ubqln1Q8R317 Gm8668-201ENSMUST00000120559 1447 ntBASIC15.75■□□□□ 0.11
Ubqln1Q8R317 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ubqln1Q8R317 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Ubqln1Q8R317 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ubqln1Q8R317 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ubqln1Q8R317 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Ubqln1Q8R317 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ubqln1Q8R317 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ubqln1Q8R317 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ubqln1Q8R317 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ubqln1Q8R317 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Ubqln1Q8R317 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.74■□□□□ 0.11
Ubqln1Q8R317 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ubqln1Q8R317 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC15.74■□□□□ 0.11
Ubqln1Q8R317 Mir5130-201ENSMUST00000175160 84 ntBASIC15.74■□□□□ 0.11
Ubqln1Q8R317 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Ubqln1Q8R317 AC153881.2-201ENSMUST00000214877 204 ntBASIC15.74■□□□□ 0.11
Ubqln1Q8R317 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ubqln1Q8R317 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ubqln1Q8R317 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Ubqln1Q8R317 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ubqln1Q8R317 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ubqln1Q8R317 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Ubqln1Q8R317 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Ubqln1Q8R317 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ubqln1Q8R317 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.73■□□□□ 0.11
Ubqln1Q8R317 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.73■□□□□ 0.11
Ubqln1Q8R317 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ubqln1Q8R317 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ubqln1Q8R317 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Ubqln1Q8R317 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ubqln1Q8R317 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ubqln1Q8R317 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ubqln1Q8R317 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ubqln1Q8R317 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ubqln1Q8R317 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ubqln1Q8R317 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ubqln1Q8R317 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ubqln1Q8R317 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ubqln1Q8R317 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ubqln1Q8R317 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.72■□□□□ 0.11
Ubqln1Q8R317 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ubqln1Q8R317 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Ubqln1Q8R317 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.72■□□□□ 0.11
Ubqln1Q8R317 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.72■□□□□ 0.11
Ubqln1Q8R317 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.72■□□□□ 0.11
Ubqln1Q8R317 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ubqln1Q8R317 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ubqln1Q8R317 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ubqln1Q8R317 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.72■□□□□ 0.11
Ubqln1Q8R317 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ubqln1Q8R317 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ubqln1Q8R317 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ubqln1Q8R317 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ubqln1Q8R317 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms