Protein–RNA interactions for Protein: Q8CIG0

Depdc1a, DEP domain-containing protein 1A, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1aQ8CIG0 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Depdc1aQ8CIG0 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC18.7■□□□□ 0.58
Depdc1aQ8CIG0 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Depdc1aQ8CIG0 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Depdc1aQ8CIG0 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.7■□□□□ 0.58
Depdc1aQ8CIG0 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Depdc1aQ8CIG0 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Depdc1aQ8CIG0 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Depdc1aQ8CIG0 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Depdc1aQ8CIG0 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Depdc1aQ8CIG0 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Depdc1aQ8CIG0 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Depdc1aQ8CIG0 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
Depdc1aQ8CIG0 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Depdc1aQ8CIG0 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Depdc1aQ8CIG0 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC18.69■□□□□ 0.58
Depdc1aQ8CIG0 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Depdc1aQ8CIG0 Birc2-201ENSMUST00000054878 378 ntBASIC18.69■□□□□ 0.58
Depdc1aQ8CIG0 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Depdc1aQ8CIG0 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC18.69■□□□□ 0.58
Depdc1aQ8CIG0 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Depdc1aQ8CIG0 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.68■□□□□ 0.58
Depdc1aQ8CIG0 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Depdc1aQ8CIG0 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Depdc1aQ8CIG0 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Depdc1aQ8CIG0 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Depdc1aQ8CIG0 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC18.68■□□□□ 0.58
Depdc1aQ8CIG0 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC18.68■□□□□ 0.58
Depdc1aQ8CIG0 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC18.68■□□□□ 0.58
Depdc1aQ8CIG0 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Depdc1aQ8CIG0 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Depdc1aQ8CIG0 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Depdc1aQ8CIG0 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.68■□□□□ 0.58
Depdc1aQ8CIG0 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Depdc1aQ8CIG0 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Depdc1aQ8CIG0 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Depdc1aQ8CIG0 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Depdc1aQ8CIG0 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Depdc1aQ8CIG0 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Depdc1aQ8CIG0 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
Depdc1aQ8CIG0 Gm9889-202ENSMUST00000206983 1577 ntBASIC18.68■□□□□ 0.58
Depdc1aQ8CIG0 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Depdc1aQ8CIG0 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Depdc1aQ8CIG0 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Depdc1aQ8CIG0 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Depdc1aQ8CIG0 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Depdc1aQ8CIG0 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Depdc1aQ8CIG0 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Depdc1aQ8CIG0 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC18.67■□□□□ 0.58
Depdc1aQ8CIG0 Rprl3-201ENSMUST00000157400 290 ntBASIC18.67■□□□□ 0.58
Depdc1aQ8CIG0 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC18.67■□□□□ 0.58
Depdc1aQ8CIG0 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Depdc1aQ8CIG0 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC18.67■□□□□ 0.58
Depdc1aQ8CIG0 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC18.67■□□□□ 0.58
Depdc1aQ8CIG0 CT009713.7-201ENSMUST00000224689 571 ntBASIC18.67■□□□□ 0.58
Depdc1aQ8CIG0 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Depdc1aQ8CIG0 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Depdc1aQ8CIG0 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Depdc1aQ8CIG0 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Depdc1aQ8CIG0 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Depdc1aQ8CIG0 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Depdc1aQ8CIG0 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Depdc1aQ8CIG0 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Depdc1aQ8CIG0 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.66■□□□□ 0.58
Depdc1aQ8CIG0 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Depdc1aQ8CIG0 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Depdc1aQ8CIG0 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Depdc1aQ8CIG0 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Depdc1aQ8CIG0 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Depdc1aQ8CIG0 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC18.66■□□□□ 0.58
Depdc1aQ8CIG0 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Depdc1aQ8CIG0 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC18.66■□□□□ 0.58
Depdc1aQ8CIG0 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Depdc1aQ8CIG0 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Depdc1aQ8CIG0 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Depdc1aQ8CIG0 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Depdc1aQ8CIG0 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Depdc1aQ8CIG0 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Depdc1aQ8CIG0 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Depdc1aQ8CIG0 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Depdc1aQ8CIG0 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Depdc1aQ8CIG0 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Depdc1aQ8CIG0 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Depdc1aQ8CIG0 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Depdc1aQ8CIG0 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.65■□□□□ 0.58
Depdc1aQ8CIG0 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Depdc1aQ8CIG0 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Depdc1aQ8CIG0 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Depdc1aQ8CIG0 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Depdc1aQ8CIG0 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Depdc1aQ8CIG0 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Depdc1aQ8CIG0 Gm36967-201ENSMUST00000193814 266 ntBASIC18.65■□□□□ 0.58
Depdc1aQ8CIG0 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC18.65■□□□□ 0.58
Depdc1aQ8CIG0 Gm36858-201ENSMUST00000194501 2391 ntBASIC18.65■□□□□ 0.58
Depdc1aQ8CIG0 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Depdc1aQ8CIG0 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Depdc1aQ8CIG0 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Depdc1aQ8CIG0 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Depdc1aQ8CIG0 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC18.65■□□□□ 0.58
Depdc1aQ8CIG0 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms