Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Vcpip1Q8CDG3 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Vcpip1Q8CDG3 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vcpip1Q8CDG3 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vcpip1Q8CDG3 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vcpip1Q8CDG3 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vcpip1Q8CDG3 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Vcpip1Q8CDG3 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vcpip1Q8CDG3 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Vcpip1Q8CDG3 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vcpip1Q8CDG3 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Vcpip1Q8CDG3 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Vcpip1Q8CDG3 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Vcpip1Q8CDG3 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Vcpip1Q8CDG3 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.88■□□□□ 0.45
Vcpip1Q8CDG3 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.88■□□□□ 0.45
Vcpip1Q8CDG3 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vcpip1Q8CDG3 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Vcpip1Q8CDG3 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vcpip1Q8CDG3 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vcpip1Q8CDG3 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vcpip1Q8CDG3 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vcpip1Q8CDG3 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vcpip1Q8CDG3 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Vcpip1Q8CDG3 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vcpip1Q8CDG3 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vcpip1Q8CDG3 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vcpip1Q8CDG3 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vcpip1Q8CDG3 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vcpip1Q8CDG3 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.88■□□□□ 0.45
Vcpip1Q8CDG3 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Vcpip1Q8CDG3 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vcpip1Q8CDG3 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Vcpip1Q8CDG3 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vcpip1Q8CDG3 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vcpip1Q8CDG3 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Vcpip1Q8CDG3 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
Vcpip1Q8CDG3 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vcpip1Q8CDG3 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vcpip1Q8CDG3 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vcpip1Q8CDG3 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.87■□□□□ 0.45
Vcpip1Q8CDG3 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.87■□□□□ 0.45
Vcpip1Q8CDG3 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Vcpip1Q8CDG3 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.87■□□□□ 0.45
Vcpip1Q8CDG3 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.87■□□□□ 0.45
Vcpip1Q8CDG3 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vcpip1Q8CDG3 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Vcpip1Q8CDG3 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vcpip1Q8CDG3 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vcpip1Q8CDG3 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Vcpip1Q8CDG3 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vcpip1Q8CDG3 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vcpip1Q8CDG3 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vcpip1Q8CDG3 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Vcpip1Q8CDG3 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vcpip1Q8CDG3 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vcpip1Q8CDG3 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vcpip1Q8CDG3 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Vcpip1Q8CDG3 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vcpip1Q8CDG3 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Vcpip1Q8CDG3 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vcpip1Q8CDG3 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vcpip1Q8CDG3 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.86■□□□□ 0.45
Vcpip1Q8CDG3 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
Vcpip1Q8CDG3 Gm27000-201ENSMUST00000182943 842 ntBASIC17.86■□□□□ 0.45
Vcpip1Q8CDG3 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vcpip1Q8CDG3 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vcpip1Q8CDG3 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vcpip1Q8CDG3 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Vcpip1Q8CDG3 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
Vcpip1Q8CDG3 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Vcpip1Q8CDG3 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vcpip1Q8CDG3 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.86■□□□□ 0.45
Vcpip1Q8CDG3 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vcpip1Q8CDG3 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vcpip1Q8CDG3 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vcpip1Q8CDG3 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vcpip1Q8CDG3 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vcpip1Q8CDG3 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vcpip1Q8CDG3 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Vcpip1Q8CDG3 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vcpip1Q8CDG3 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Vcpip1Q8CDG3 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vcpip1Q8CDG3 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
Vcpip1Q8CDG3 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vcpip1Q8CDG3 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vcpip1Q8CDG3 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Vcpip1Q8CDG3 Gm21814-202ENSMUST00000203277 873 ntBASIC17.85■□□□□ 0.45
Vcpip1Q8CDG3 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.85■□□□□ 0.45
Vcpip1Q8CDG3 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vcpip1Q8CDG3 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vcpip1Q8CDG3 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vcpip1Q8CDG3 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vcpip1Q8CDG3 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vcpip1Q8CDG3 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Vcpip1Q8CDG3 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vcpip1Q8CDG3 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vcpip1Q8CDG3 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vcpip1Q8CDG3 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vcpip1Q8CDG3 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms