Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Gm12896-201ENSMUST00000118430 226 ntBASIC14.95□□□□□ -0.02
Lysmd4Q8CC84 Gm13158-201ENSMUST00000122007 736 ntBASIC14.95□□□□□ -0.02
Lysmd4Q8CC84 Gm37025-201ENSMUST00000195159 829 ntBASIC14.95□□□□□ -0.02
Lysmd4Q8CC84 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Lysmd4Q8CC84 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC14.95□□□□□ -0.02
Lysmd4Q8CC84 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lysmd4Q8CC84 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lysmd4Q8CC84 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lysmd4Q8CC84 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Lysmd4Q8CC84 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Lysmd4Q8CC84 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lysmd4Q8CC84 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lysmd4Q8CC84 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lysmd4Q8CC84 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Lysmd4Q8CC84 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lysmd4Q8CC84 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Lysmd4Q8CC84 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Lysmd4Q8CC84 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lysmd4Q8CC84 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Lysmd4Q8CC84 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Lysmd4Q8CC84 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Lysmd4Q8CC84 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lysmd4Q8CC84 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lysmd4Q8CC84 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Lysmd4Q8CC84 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.94□□□□□ -0.02
Lysmd4Q8CC84 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lysmd4Q8CC84 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Lysmd4Q8CC84 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lysmd4Q8CC84 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lysmd4Q8CC84 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC14.94□□□□□ -0.02
Lysmd4Q8CC84 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Lysmd4Q8CC84 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lysmd4Q8CC84 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lysmd4Q8CC84 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Lysmd4Q8CC84 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lysmd4Q8CC84 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Lysmd4Q8CC84 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC14.94□□□□□ -0.02
Lysmd4Q8CC84 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lysmd4Q8CC84 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lysmd4Q8CC84 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Lysmd4Q8CC84 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lysmd4Q8CC84 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.93□□□□□ -0.02
Lysmd4Q8CC84 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lysmd4Q8CC84 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
Lysmd4Q8CC84 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lysmd4Q8CC84 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lysmd4Q8CC84 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lysmd4Q8CC84 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lysmd4Q8CC84 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lysmd4Q8CC84 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lysmd4Q8CC84 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC14.93□□□□□ -0.02
Lysmd4Q8CC84 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lysmd4Q8CC84 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lysmd4Q8CC84 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lysmd4Q8CC84 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lysmd4Q8CC84 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lysmd4Q8CC84 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Lysmd4Q8CC84 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lysmd4Q8CC84 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC14.93□□□□□ -0.02
Lysmd4Q8CC84 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC14.93□□□□□ -0.02
Lysmd4Q8CC84 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC14.93□□□□□ -0.02
Lysmd4Q8CC84 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lysmd4Q8CC84 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Lysmd4Q8CC84 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lysmd4Q8CC84 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lysmd4Q8CC84 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lysmd4Q8CC84 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lysmd4Q8CC84 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.93□□□□□ -0.02
Lysmd4Q8CC84 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Lysmd4Q8CC84 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lysmd4Q8CC84 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lysmd4Q8CC84 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Lysmd4Q8CC84 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.93□□□□□ -0.02
Lysmd4Q8CC84 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lysmd4Q8CC84 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lysmd4Q8CC84 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lysmd4Q8CC84 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lysmd4Q8CC84 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lysmd4Q8CC84 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.92□□□□□ -0.02
Lysmd4Q8CC84 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lysmd4Q8CC84 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lysmd4Q8CC84 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lysmd4Q8CC84 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lysmd4Q8CC84 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Lysmd4Q8CC84 Gm12382-201ENSMUST00000122005 922 ntBASIC14.92□□□□□ -0.02
Lysmd4Q8CC84 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC14.92□□□□□ -0.02
Lysmd4Q8CC84 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lysmd4Q8CC84 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lysmd4Q8CC84 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lysmd4Q8CC84 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lysmd4Q8CC84 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lysmd4Q8CC84 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lysmd4Q8CC84 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
Lysmd4Q8CC84 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Lysmd4Q8CC84 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Lysmd4Q8CC84 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lysmd4Q8CC84 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Lysmd4Q8CC84 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
Lysmd4Q8CC84 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lysmd4Q8CC84 Gm45203-201ENSMUST00000206384 1831 ntBASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms