Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfx6Q8C7R7 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx6Q8C7R7 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx6Q8C7R7 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Rfx6Q8C7R7 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
Rfx6Q8C7R7 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Rfx6Q8C7R7 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx6Q8C7R7 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx6Q8C7R7 Gm12527-201ENSMUST00000117967 564 ntBASIC16.93■□□□□ 0.3
Rfx6Q8C7R7 Gm15378-201ENSMUST00000121894 207 ntBASIC16.93■□□□□ 0.3
Rfx6Q8C7R7 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx6Q8C7R7 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.93■□□□□ 0.3
Rfx6Q8C7R7 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC16.93■□□□□ 0.3
Rfx6Q8C7R7 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC16.93■□□□□ 0.3
Rfx6Q8C7R7 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx6Q8C7R7 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx6Q8C7R7 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx6Q8C7R7 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Rfx6Q8C7R7 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx6Q8C7R7 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx6Q8C7R7 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx6Q8C7R7 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx6Q8C7R7 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.93■□□□□ 0.3
Rfx6Q8C7R7 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx6Q8C7R7 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx6Q8C7R7 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx6Q8C7R7 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx6Q8C7R7 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx6Q8C7R7 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx6Q8C7R7 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.92■□□□□ 0.3
Rfx6Q8C7R7 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx6Q8C7R7 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx6Q8C7R7 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx6Q8C7R7 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx6Q8C7R7 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Rfx6Q8C7R7 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
Rfx6Q8C7R7 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC16.92■□□□□ 0.3
Rfx6Q8C7R7 Gm27000-201ENSMUST00000182943 842 ntBASIC16.92■□□□□ 0.3
Rfx6Q8C7R7 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx6Q8C7R7 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx6Q8C7R7 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx6Q8C7R7 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx6Q8C7R7 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx6Q8C7R7 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.92■□□□□ 0.3
Rfx6Q8C7R7 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx6Q8C7R7 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx6Q8C7R7 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx6Q8C7R7 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx6Q8C7R7 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.91■□□□□ 0.3
Rfx6Q8C7R7 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Rfx6Q8C7R7 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx6Q8C7R7 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx6Q8C7R7 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx6Q8C7R7 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.91■□□□□ 0.3
Rfx6Q8C7R7 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx6Q8C7R7 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx6Q8C7R7 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Rfx6Q8C7R7 Gm5643-201ENSMUST00000117081 966 ntBASIC16.91■□□□□ 0.3
Rfx6Q8C7R7 Gm12085-201ENSMUST00000119263 940 ntBASIC16.91■□□□□ 0.3
Rfx6Q8C7R7 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx6Q8C7R7 Gm9731-201ENSMUST00000209480 747 ntBASIC16.91■□□□□ 0.3
Rfx6Q8C7R7 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.91■□□□□ 0.3
Rfx6Q8C7R7 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx6Q8C7R7 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx6Q8C7R7 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Rfx6Q8C7R7 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx6Q8C7R7 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx6Q8C7R7 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx6Q8C7R7 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfx6Q8C7R7 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfx6Q8C7R7 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfx6Q8C7R7 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfx6Q8C7R7 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Rfx6Q8C7R7 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfx6Q8C7R7 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfx6Q8C7R7 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rfx6Q8C7R7 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfx6Q8C7R7 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Rfx6Q8C7R7 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.9■□□□□ 0.3
Rfx6Q8C7R7 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfx6Q8C7R7 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Rfx6Q8C7R7 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Rfx6Q8C7R7 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rfx6Q8C7R7 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rfx6Q8C7R7 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rfx6Q8C7R7 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfx6Q8C7R7 Dancr-204ENSMUST00000132389 2347 ntBASIC16.9■□□□□ 0.3
Rfx6Q8C7R7 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Rfx6Q8C7R7 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.89■□□□□ 0.3
Rfx6Q8C7R7 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Rfx6Q8C7R7 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rfx6Q8C7R7 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.89■□□□□ 0.29
Rfx6Q8C7R7 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Rfx6Q8C7R7 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.89■□□□□ 0.29
Rfx6Q8C7R7 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.89■□□□□ 0.29
Rfx6Q8C7R7 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Rfx6Q8C7R7 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.89■□□□□ 0.29
Rfx6Q8C7R7 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rfx6Q8C7R7 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.89■□□□□ 0.29
Rfx6Q8C7R7 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms