Protein–RNA interactions for Protein: Q8BR37

Nhlrc1, E3 ubiquitin-protein ligase NHLRC1, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc1Q8BR37 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Nhlrc1Q8BR37 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nhlrc1Q8BR37 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nhlrc1Q8BR37 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nhlrc1Q8BR37 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Nhlrc1Q8BR37 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nhlrc1Q8BR37 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nhlrc1Q8BR37 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Nhlrc1Q8BR37 Gm27357-201ENSMUST00000183754 135 ntBASIC12.92□□□□□ -0.34
Nhlrc1Q8BR37 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
Nhlrc1Q8BR37 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC12.92□□□□□ -0.34
Nhlrc1Q8BR37 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nhlrc1Q8BR37 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nhlrc1Q8BR37 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nhlrc1Q8BR37 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nhlrc1Q8BR37 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nhlrc1Q8BR37 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nhlrc1Q8BR37 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Nhlrc1Q8BR37 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nhlrc1Q8BR37 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC12.92□□□□□ -0.34
Nhlrc1Q8BR37 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nhlrc1Q8BR37 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nhlrc1Q8BR37 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nhlrc1Q8BR37 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nhlrc1Q8BR37 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nhlrc1Q8BR37 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nhlrc1Q8BR37 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nhlrc1Q8BR37 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nhlrc1Q8BR37 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nhlrc1Q8BR37 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nhlrc1Q8BR37 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nhlrc1Q8BR37 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Nhlrc1Q8BR37 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nhlrc1Q8BR37 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC12.91□□□□□ -0.34
Nhlrc1Q8BR37 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nhlrc1Q8BR37 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Nhlrc1Q8BR37 Mir770-201ENSMUST00000103252 94 ntBASIC12.91□□□□□ -0.34
Nhlrc1Q8BR37 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nhlrc1Q8BR37 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC12.91□□□□□ -0.34
Nhlrc1Q8BR37 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nhlrc1Q8BR37 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC12.91□□□□□ -0.34
Nhlrc1Q8BR37 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC12.91□□□□□ -0.34
Nhlrc1Q8BR37 Gm28033-201ENSMUST00000184224 96 ntBASIC12.91□□□□□ -0.34
Nhlrc1Q8BR37 Gm17971-201ENSMUST00000190239 806 ntBASIC12.91□□□□□ -0.34
Nhlrc1Q8BR37 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nhlrc1Q8BR37 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nhlrc1Q8BR37 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nhlrc1Q8BR37 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nhlrc1Q8BR37 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Nhlrc1Q8BR37 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Nhlrc1Q8BR37 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nhlrc1Q8BR37 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC12.91□□□□□ -0.34
Nhlrc1Q8BR37 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Nhlrc1Q8BR37 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nhlrc1Q8BR37 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Nhlrc1Q8BR37 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Nhlrc1Q8BR37 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nhlrc1Q8BR37 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nhlrc1Q8BR37 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC12.91□□□□□ -0.34
Nhlrc1Q8BR37 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nhlrc1Q8BR37 Gm45244-201ENSMUST00000211328 2200 ntBASIC12.9□□□□□ -0.34
Nhlrc1Q8BR37 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nhlrc1Q8BR37 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nhlrc1Q8BR37 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC12.9□□□□□ -0.34
Nhlrc1Q8BR37 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nhlrc1Q8BR37 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nhlrc1Q8BR37 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nhlrc1Q8BR37 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nhlrc1Q8BR37 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nhlrc1Q8BR37 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nhlrc1Q8BR37 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nhlrc1Q8BR37 Gm14464-201ENSMUST00000119658 1254 ntBASIC12.9□□□□□ -0.34
Nhlrc1Q8BR37 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nhlrc1Q8BR37 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC12.9□□□□□ -0.34
Nhlrc1Q8BR37 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Nhlrc1Q8BR37 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Nhlrc1Q8BR37 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nhlrc1Q8BR37 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC12.9□□□□□ -0.34
Nhlrc1Q8BR37 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nhlrc1Q8BR37 Otx2os1-206ENSMUST00000228153 787 ntBASIC12.9□□□□□ -0.34
Nhlrc1Q8BR37 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nhlrc1Q8BR37 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nhlrc1Q8BR37 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nhlrc1Q8BR37 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nhlrc1Q8BR37 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nhlrc1Q8BR37 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nhlrc1Q8BR37 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Nhlrc1Q8BR37 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nhlrc1Q8BR37 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nhlrc1Q8BR37 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Nhlrc1Q8BR37 AC123834.2-201ENSMUST00000224038 2340 ntBASIC12.9□□□□□ -0.34
Nhlrc1Q8BR37 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Nhlrc1Q8BR37 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nhlrc1Q8BR37 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nhlrc1Q8BR37 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Nhlrc1Q8BR37 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Nhlrc1Q8BR37 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
Nhlrc1Q8BR37 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nhlrc1Q8BR37 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nhlrc1Q8BR37 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms