Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc40Q8BI79 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc40Q8BI79 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc40Q8BI79 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
Ccdc40Q8BI79 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc40Q8BI79 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.35■□□□□ 0.37
Ccdc40Q8BI79 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc40Q8BI79 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc40Q8BI79 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.35■□□□□ 0.37
Ccdc40Q8BI79 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc40Q8BI79 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc40Q8BI79 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Ccdc40Q8BI79 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Ccdc40Q8BI79 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc40Q8BI79 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc40Q8BI79 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Ccdc40Q8BI79 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
Ccdc40Q8BI79 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.34■□□□□ 0.37
Ccdc40Q8BI79 Mir5122-201ENSMUST00000175004 89 ntBASIC17.34■□□□□ 0.37
Ccdc40Q8BI79 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.34■□□□□ 0.37
Ccdc40Q8BI79 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
Ccdc40Q8BI79 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc40Q8BI79 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc40Q8BI79 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc40Q8BI79 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Ccdc40Q8BI79 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Ccdc40Q8BI79 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Ccdc40Q8BI79 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc40Q8BI79 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc40Q8BI79 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.34■□□□□ 0.37
Ccdc40Q8BI79 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
Ccdc40Q8BI79 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ccdc40Q8BI79 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ccdc40Q8BI79 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.33■□□□□ 0.37
Ccdc40Q8BI79 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Ccdc40Q8BI79 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Ccdc40Q8BI79 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
Ccdc40Q8BI79 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.33■□□□□ 0.37
Ccdc40Q8BI79 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ccdc40Q8BI79 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ccdc40Q8BI79 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Ccdc40Q8BI79 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ccdc40Q8BI79 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.33■□□□□ 0.37
Ccdc40Q8BI79 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc40Q8BI79 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc40Q8BI79 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc40Q8BI79 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc40Q8BI79 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.33■□□□□ 0.36
Ccdc40Q8BI79 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.33■□□□□ 0.36
Ccdc40Q8BI79 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc40Q8BI79 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.33■□□□□ 0.36
Ccdc40Q8BI79 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc40Q8BI79 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc40Q8BI79 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc40Q8BI79 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc40Q8BI79 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc40Q8BI79 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
Ccdc40Q8BI79 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc40Q8BI79 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc40Q8BI79 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc40Q8BI79 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc40Q8BI79 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc40Q8BI79 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc40Q8BI79 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc40Q8BI79 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc40Q8BI79 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc40Q8BI79 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc40Q8BI79 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Ccdc40Q8BI79 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc40Q8BI79 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc40Q8BI79 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.32■□□□□ 0.36
Ccdc40Q8BI79 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.32■□□□□ 0.36
Ccdc40Q8BI79 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc40Q8BI79 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.32■□□□□ 0.36
Ccdc40Q8BI79 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc40Q8BI79 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc40Q8BI79 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc40Q8BI79 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc40Q8BI79 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.32■□□□□ 0.36
Ccdc40Q8BI79 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc40Q8BI79 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc40Q8BI79 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Ccdc40Q8BI79 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc40Q8BI79 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc40Q8BI79 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Ccdc40Q8BI79 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.31■□□□□ 0.36
Ccdc40Q8BI79 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.31■□□□□ 0.36
Ccdc40Q8BI79 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Ccdc40Q8BI79 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc40Q8BI79 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc40Q8BI79 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc40Q8BI79 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc40Q8BI79 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc40Q8BI79 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc40Q8BI79 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc40Q8BI79 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc40Q8BI79 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc40Q8BI79 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc40Q8BI79 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc40Q8BI79 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms