Protein–RNA interactions for Protein: Q8BGD7

Npas4, Neuronal PAS domain-containing protein 4, mousemouse

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas4Q8BGD7 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Npas4Q8BGD7 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Npas4Q8BGD7 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC17.5■□□□□ 0.39
Npas4Q8BGD7 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Npas4Q8BGD7 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC17.5■□□□□ 0.39
Npas4Q8BGD7 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Npas4Q8BGD7 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Npas4Q8BGD7 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Npas4Q8BGD7 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Npas4Q8BGD7 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Npas4Q8BGD7 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Npas4Q8BGD7 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Npas4Q8BGD7 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Npas4Q8BGD7 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Npas4Q8BGD7 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Npas4Q8BGD7 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Npas4Q8BGD7 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
Npas4Q8BGD7 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Npas4Q8BGD7 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Npas4Q8BGD7 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC17.49■□□□□ 0.39
Npas4Q8BGD7 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC17.49■□□□□ 0.39
Npas4Q8BGD7 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Npas4Q8BGD7 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Npas4Q8BGD7 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Npas4Q8BGD7 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Npas4Q8BGD7 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Npas4Q8BGD7 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Npas4Q8BGD7 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Npas4Q8BGD7 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.48■□□□□ 0.39
Npas4Q8BGD7 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Npas4Q8BGD7 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Npas4Q8BGD7 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Npas4Q8BGD7 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Npas4Q8BGD7 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Npas4Q8BGD7 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Npas4Q8BGD7 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Npas4Q8BGD7 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.48■□□□□ 0.39
Npas4Q8BGD7 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Npas4Q8BGD7 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Npas4Q8BGD7 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Npas4Q8BGD7 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC17.48■□□□□ 0.39
Npas4Q8BGD7 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC17.48■□□□□ 0.39
Npas4Q8BGD7 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC17.48■□□□□ 0.39
Npas4Q8BGD7 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Npas4Q8BGD7 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC17.48■□□□□ 0.39
Npas4Q8BGD7 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Npas4Q8BGD7 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Npas4Q8BGD7 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Npas4Q8BGD7 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Npas4Q8BGD7 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Npas4Q8BGD7 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Npas4Q8BGD7 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Npas4Q8BGD7 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Npas4Q8BGD7 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Npas4Q8BGD7 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Npas4Q8BGD7 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Npas4Q8BGD7 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Npas4Q8BGD7 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Npas4Q8BGD7 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.47■□□□□ 0.39
Npas4Q8BGD7 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Npas4Q8BGD7 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Npas4Q8BGD7 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Npas4Q8BGD7 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Npas4Q8BGD7 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Npas4Q8BGD7 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Npas4Q8BGD7 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.47■□□□□ 0.39
Npas4Q8BGD7 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Npas4Q8BGD7 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC17.47■□□□□ 0.39
Npas4Q8BGD7 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC17.47■□□□□ 0.39
Npas4Q8BGD7 Mir5126-201ENSMUST00000175513 77 ntBASIC17.47■□□□□ 0.39
Npas4Q8BGD7 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Npas4Q8BGD7 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC17.47■□□□□ 0.39
Npas4Q8BGD7 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Npas4Q8BGD7 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC17.47■□□□□ 0.39
Npas4Q8BGD7 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Npas4Q8BGD7 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Npas4Q8BGD7 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Npas4Q8BGD7 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Npas4Q8BGD7 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Npas4Q8BGD7 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Npas4Q8BGD7 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Npas4Q8BGD7 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Npas4Q8BGD7 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Npas4Q8BGD7 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Npas4Q8BGD7 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Npas4Q8BGD7 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Npas4Q8BGD7 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Npas4Q8BGD7 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Npas4Q8BGD7 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Npas4Q8BGD7 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.46■□□□□ 0.39
Npas4Q8BGD7 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.46■□□□□ 0.39
Npas4Q8BGD7 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Npas4Q8BGD7 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Npas4Q8BGD7 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Npas4Q8BGD7 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.46■□□□□ 0.39
Npas4Q8BGD7 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
Npas4Q8BGD7 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Npas4Q8BGD7 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Npas4Q8BGD7 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC17.46■□□□□ 0.39
Npas4Q8BGD7 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms