Protein–RNA interactions for Protein: Q61009

Scarb1, Scavenger receptor class B member 1, mousemouse

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb1Q61009 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scarb1Q61009 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scarb1Q61009 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scarb1Q61009 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scarb1Q61009 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scarb1Q61009 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scarb1Q61009 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scarb1Q61009 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Scarb1Q61009 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC14.06□□□□□ -0.16
Scarb1Q61009 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scarb1Q61009 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scarb1Q61009 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scarb1Q61009 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scarb1Q61009 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.06□□□□□ -0.16
Scarb1Q61009 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scarb1Q61009 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Scarb1Q61009 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scarb1Q61009 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC14.06□□□□□ -0.16
Scarb1Q61009 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Scarb1Q61009 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC14.06□□□□□ -0.16
Scarb1Q61009 Rab3c-203ENSMUST00000224180 967 ntBASIC14.06□□□□□ -0.16
Scarb1Q61009 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scarb1Q61009 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scarb1Q61009 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scarb1Q61009 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scarb1Q61009 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Scarb1Q61009 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scarb1Q61009 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Scarb1Q61009 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Scarb1Q61009 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scarb1Q61009 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Scarb1Q61009 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scarb1Q61009 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scarb1Q61009 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scarb1Q61009 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.05□□□□□ -0.16
Scarb1Q61009 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scarb1Q61009 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Scarb1Q61009 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scarb1Q61009 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scarb1Q61009 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Scarb1Q61009 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC14.05□□□□□ -0.16
Scarb1Q61009 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Scarb1Q61009 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Scarb1Q61009 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scarb1Q61009 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scarb1Q61009 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scarb1Q61009 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scarb1Q61009 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scarb1Q61009 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scarb1Q61009 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Scarb1Q61009 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scarb1Q61009 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scarb1Q61009 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Scarb1Q61009 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scarb1Q61009 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scarb1Q61009 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scarb1Q61009 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scarb1Q61009 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.04□□□□□ -0.16
Scarb1Q61009 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Scarb1Q61009 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scarb1Q61009 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scarb1Q61009 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
Scarb1Q61009 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scarb1Q61009 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scarb1Q61009 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scarb1Q61009 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Scarb1Q61009 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scarb1Q61009 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Scarb1Q61009 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Scarb1Q61009 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Scarb1Q61009 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Scarb1Q61009 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scarb1Q61009 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Scarb1Q61009 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scarb1Q61009 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Scarb1Q61009 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scarb1Q61009 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scarb1Q61009 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scarb1Q61009 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Scarb1Q61009 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Scarb1Q61009 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Scarb1Q61009 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scarb1Q61009 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scarb1Q61009 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scarb1Q61009 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.03□□□□□ -0.16
Scarb1Q61009 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scarb1Q61009 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Scarb1Q61009 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scarb1Q61009 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scarb1Q61009 Gm10849-201ENSMUST00000100397 618 ntBASIC14.03□□□□□ -0.16
Scarb1Q61009 Gm13148-201ENSMUST00000118892 745 ntBASIC14.03□□□□□ -0.16
Scarb1Q61009 Gm6576-201ENSMUST00000169678 883 ntBASIC14.03□□□□□ -0.16
Scarb1Q61009 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC14.03□□□□□ -0.16
Scarb1Q61009 Gm10138-203ENSMUST00000206952 366 ntBASIC14.03□□□□□ -0.16
Scarb1Q61009 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC14.03□□□□□ -0.16
Scarb1Q61009 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scarb1Q61009 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scarb1Q61009 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Scarb1Q61009 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Scarb1Q61009 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms