Protein–RNA interactions for Protein: Q5XF90

Atp13a4, Probable cation-transporting ATPase 13A4, mousemouse

Predictions only

Length 1,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp13a4Q5XF90 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Atp13a4Q5XF90 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Atp13a4Q5XF90 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Atp13a4Q5XF90 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Atp13a4Q5XF90 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Atp13a4Q5XF90 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.98■□□□□ 0.47
Atp13a4Q5XF90 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Atp13a4Q5XF90 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.98■□□□□ 0.47
Atp13a4Q5XF90 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Atp13a4Q5XF90 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Atp13a4Q5XF90 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Atp13a4Q5XF90 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Atp13a4Q5XF90 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Atp13a4Q5XF90 Gm21559-201ENSMUST00000220638 855 ntBASIC17.98■□□□□ 0.47
Atp13a4Q5XF90 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Atp13a4Q5XF90 Gm8587-201ENSMUST00000076538 843 ntBASIC17.98■□□□□ 0.47
Atp13a4Q5XF90 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Atp13a4Q5XF90 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Atp13a4Q5XF90 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Atp13a4Q5XF90 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Atp13a4Q5XF90 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Atp13a4Q5XF90 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Atp13a4Q5XF90 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Atp13a4Q5XF90 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Atp13a4Q5XF90 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atp13a4Q5XF90 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.97■□□□□ 0.47
Atp13a4Q5XF90 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atp13a4Q5XF90 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atp13a4Q5XF90 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atp13a4Q5XF90 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atp13a4Q5XF90 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atp13a4Q5XF90 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atp13a4Q5XF90 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
Atp13a4Q5XF90 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atp13a4Q5XF90 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atp13a4Q5XF90 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atp13a4Q5XF90 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Atp13a4Q5XF90 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atp13a4Q5XF90 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
Atp13a4Q5XF90 Gm11336-201ENSMUST00000118168 334 ntBASIC17.97■□□□□ 0.47
Atp13a4Q5XF90 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Atp13a4Q5XF90 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Atp13a4Q5XF90 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.97■□□□□ 0.47
Atp13a4Q5XF90 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Atp13a4Q5XF90 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atp13a4Q5XF90 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atp13a4Q5XF90 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atp13a4Q5XF90 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atp13a4Q5XF90 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atp13a4Q5XF90 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atp13a4Q5XF90 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atp13a4Q5XF90 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atp13a4Q5XF90 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Atp13a4Q5XF90 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atp13a4Q5XF90 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Atp13a4Q5XF90 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Atp13a4Q5XF90 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Atp13a4Q5XF90 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Atp13a4Q5XF90 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Atp13a4Q5XF90 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Atp13a4Q5XF90 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Atp13a4Q5XF90 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Atp13a4Q5XF90 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.96■□□□□ 0.47
Atp13a4Q5XF90 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Atp13a4Q5XF90 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Atp13a4Q5XF90 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Atp13a4Q5XF90 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
Atp13a4Q5XF90 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Atp13a4Q5XF90 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Atp13a4Q5XF90 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Atp13a4Q5XF90 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Atp13a4Q5XF90 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Atp13a4Q5XF90 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Atp13a4Q5XF90 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Atp13a4Q5XF90 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Atp13a4Q5XF90 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Atp13a4Q5XF90 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.96■□□□□ 0.47
Atp13a4Q5XF90 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.96■□□□□ 0.47
Atp13a4Q5XF90 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Atp13a4Q5XF90 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.96■□□□□ 0.46
Atp13a4Q5XF90 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Atp13a4Q5XF90 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Atp13a4Q5XF90 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Atp13a4Q5XF90 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Atp13a4Q5XF90 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Atp13a4Q5XF90 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.95■□□□□ 0.46
Atp13a4Q5XF90 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Atp13a4Q5XF90 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Atp13a4Q5XF90 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Atp13a4Q5XF90 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Atp13a4Q5XF90 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Atp13a4Q5XF90 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Atp13a4Q5XF90 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.95■□□□□ 0.46
Atp13a4Q5XF90 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Atp13a4Q5XF90 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.95■□□□□ 0.46
Atp13a4Q5XF90 Gm18101-201ENSMUST00000215769 548 ntBASIC17.95■□□□□ 0.46
Atp13a4Q5XF90 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Atp13a4Q5XF90 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
Atp13a4Q5XF90 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Atp13a4Q5XF90 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms