Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC12.99□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC12.99□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Rab3c-203ENSMUST00000224180 967 ntBASIC12.99□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Gm9867-201ENSMUST00000192212 2647 ntBASIC12.98□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC12.98□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 AL590614.2-201ENSMUST00000225374 1937 ntBASIC12.98□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC12.97□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC12.97□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC12.96□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC12.96□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC12.96□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC12.96□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC12.96□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms