Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC15.66■□□□□ 0.1
Trim40Q3UWA4 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC15.66■□□□□ 0.1
Trim40Q3UWA4 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim40Q3UWA4 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC15.66■□□□□ 0.1
Trim40Q3UWA4 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC15.66■□□□□ 0.1
Trim40Q3UWA4 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Trim40Q3UWA4 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim40Q3UWA4 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim40Q3UWA4 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim40Q3UWA4 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim40Q3UWA4 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.66■□□□□ 0.1
Trim40Q3UWA4 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Trim40Q3UWA4 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim40Q3UWA4 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim40Q3UWA4 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Trim40Q3UWA4 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim40Q3UWA4 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim40Q3UWA4 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.66■□□□□ 0.1
Trim40Q3UWA4 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim40Q3UWA4 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim40Q3UWA4 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.65■□□□□ 0.1
Trim40Q3UWA4 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trim40Q3UWA4 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Trim40Q3UWA4 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Trim40Q3UWA4 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim40Q3UWA4 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trim40Q3UWA4 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim40Q3UWA4 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC15.65■□□□□ 0.1
Trim40Q3UWA4 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Trim40Q3UWA4 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trim40Q3UWA4 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Trim40Q3UWA4 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.65■□□□□ 0.1
Trim40Q3UWA4 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim40Q3UWA4 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim40Q3UWA4 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim40Q3UWA4 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim40Q3UWA4 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim40Q3UWA4 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
Trim40Q3UWA4 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.65■□□□□ 0.1
Trim40Q3UWA4 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Trim40Q3UWA4 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Trim40Q3UWA4 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim40Q3UWA4 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim40Q3UWA4 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim40Q3UWA4 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.64■□□□□ 0.09
Trim40Q3UWA4 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Trim40Q3UWA4 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trim40Q3UWA4 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim40Q3UWA4 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC15.64■□□□□ 0.09
Trim40Q3UWA4 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Trim40Q3UWA4 Gm11643-201ENSMUST00000119578 864 ntBASIC15.64■□□□□ 0.09
Trim40Q3UWA4 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim40Q3UWA4 Mir5133-201ENSMUST00000174955 77 ntBASIC15.64■□□□□ 0.09
Trim40Q3UWA4 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC15.64■□□□□ 0.09
Trim40Q3UWA4 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim40Q3UWA4 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim40Q3UWA4 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim40Q3UWA4 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim40Q3UWA4 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trim40Q3UWA4 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim40Q3UWA4 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trim40Q3UWA4 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Trim40Q3UWA4 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim40Q3UWA4 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.64■□□□□ 0.09
Trim40Q3UWA4 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim40Q3UWA4 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.64■□□□□ 0.09
Trim40Q3UWA4 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim40Q3UWA4 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim40Q3UWA4 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trim40Q3UWA4 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim40Q3UWA4 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim40Q3UWA4 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC15.63■□□□□ 0.09
Trim40Q3UWA4 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trim40Q3UWA4 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim40Q3UWA4 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim40Q3UWA4 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim40Q3UWA4 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim40Q3UWA4 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim40Q3UWA4 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC15.63■□□□□ 0.09
Trim40Q3UWA4 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.63■□□□□ 0.09
Trim40Q3UWA4 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim40Q3UWA4 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim40Q3UWA4 Gm8495-201ENSMUST00000188740 694 ntBASIC15.63■□□□□ 0.09
Trim40Q3UWA4 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim40Q3UWA4 Rab3c-203ENSMUST00000224180 967 ntBASIC15.63■□□□□ 0.09
Trim40Q3UWA4 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim40Q3UWA4 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trim40Q3UWA4 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim40Q3UWA4 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim40Q3UWA4 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim40Q3UWA4 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Trim40Q3UWA4 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim40Q3UWA4 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
Trim40Q3UWA4 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim40Q3UWA4 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim40Q3UWA4 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim40Q3UWA4 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Trim40Q3UWA4 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim40Q3UWA4 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
Trim40Q3UWA4 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms