Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdkl5Q3UTQ8 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cdkl5Q3UTQ8 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Cdkl5Q3UTQ8 Gm6433-201ENSMUST00000118634 875 ntBASIC19.26■□□□□ 0.67
Cdkl5Q3UTQ8 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC19.26■□□□□ 0.67
Cdkl5Q3UTQ8 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC19.26■□□□□ 0.67
Cdkl5Q3UTQ8 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdkl5Q3UTQ8 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC19.26■□□□□ 0.67
Cdkl5Q3UTQ8 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdkl5Q3UTQ8 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Cdkl5Q3UTQ8 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdkl5Q3UTQ8 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdkl5Q3UTQ8 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdkl5Q3UTQ8 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdkl5Q3UTQ8 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdkl5Q3UTQ8 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Cdkl5Q3UTQ8 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdkl5Q3UTQ8 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdkl5Q3UTQ8 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdkl5Q3UTQ8 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC19.25■□□□□ 0.67
Cdkl5Q3UTQ8 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Cdkl5Q3UTQ8 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cdkl5Q3UTQ8 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC19.25■□□□□ 0.67
Cdkl5Q3UTQ8 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdkl5Q3UTQ8 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Cdkl5Q3UTQ8 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdkl5Q3UTQ8 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdkl5Q3UTQ8 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdkl5Q3UTQ8 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdkl5Q3UTQ8 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Cdkl5Q3UTQ8 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdkl5Q3UTQ8 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cdkl5Q3UTQ8 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Cdkl5Q3UTQ8 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdkl5Q3UTQ8 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdkl5Q3UTQ8 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cdkl5Q3UTQ8 Gm26596-201ENSMUST00000180464 2655 ntBASIC19.24■□□□□ 0.67
Cdkl5Q3UTQ8 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdkl5Q3UTQ8 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Cdkl5Q3UTQ8 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC19.24■□□□□ 0.67
Cdkl5Q3UTQ8 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cdkl5Q3UTQ8 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdkl5Q3UTQ8 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC19.24■□□□□ 0.67
Cdkl5Q3UTQ8 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC19.24■□□□□ 0.67
Cdkl5Q3UTQ8 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC19.24■□□□□ 0.67
Cdkl5Q3UTQ8 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdkl5Q3UTQ8 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Cdkl5Q3UTQ8 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Cdkl5Q3UTQ8 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdkl5Q3UTQ8 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdkl5Q3UTQ8 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cdkl5Q3UTQ8 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
Cdkl5Q3UTQ8 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cdkl5Q3UTQ8 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdkl5Q3UTQ8 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdkl5Q3UTQ8 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Cdkl5Q3UTQ8 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
Cdkl5Q3UTQ8 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cdkl5Q3UTQ8 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdkl5Q3UTQ8 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC19.23■□□□□ 0.67
Cdkl5Q3UTQ8 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Cdkl5Q3UTQ8 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdkl5Q3UTQ8 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdkl5Q3UTQ8 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cdkl5Q3UTQ8 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdkl5Q3UTQ8 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdkl5Q3UTQ8 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cdkl5Q3UTQ8 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC19.23■□□□□ 0.67
Cdkl5Q3UTQ8 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
Cdkl5Q3UTQ8 AC134329.2-201ENSMUST00000217897 428 ntBASIC19.23■□□□□ 0.67
Cdkl5Q3UTQ8 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdkl5Q3UTQ8 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC19.23■□□□□ 0.67
Cdkl5Q3UTQ8 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cdkl5Q3UTQ8 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdkl5Q3UTQ8 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Cdkl5Q3UTQ8 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Cdkl5Q3UTQ8 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdkl5Q3UTQ8 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdkl5Q3UTQ8 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdkl5Q3UTQ8 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cdkl5Q3UTQ8 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdkl5Q3UTQ8 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
Cdkl5Q3UTQ8 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdkl5Q3UTQ8 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdkl5Q3UTQ8 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC19.22■□□□□ 0.67
Cdkl5Q3UTQ8 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Cdkl5Q3UTQ8 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdkl5Q3UTQ8 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Cdkl5Q3UTQ8 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Cdkl5Q3UTQ8 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC19.22■□□□□ 0.67
Cdkl5Q3UTQ8 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC19.22■□□□□ 0.67
Cdkl5Q3UTQ8 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Cdkl5Q3UTQ8 Gm3272-201ENSMUST00000181181 1229 ntBASIC19.22■□□□□ 0.67
Cdkl5Q3UTQ8 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cdkl5Q3UTQ8 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdkl5Q3UTQ8 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cdkl5Q3UTQ8 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdkl5Q3UTQ8 Gm10566-201ENSMUST00000086739 996 ntBASIC19.22■□□□□ 0.67
Cdkl5Q3UTQ8 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdkl5Q3UTQ8 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms