Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Trim63Q38HM4 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim63Q38HM4 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim63Q38HM4 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim63Q38HM4 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim63Q38HM4 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim63Q38HM4 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim63Q38HM4 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Trim63Q38HM4 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC13.81□□□□□ -0.2
Trim63Q38HM4 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim63Q38HM4 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trim63Q38HM4 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim63Q38HM4 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim63Q38HM4 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC13.81□□□□□ -0.2
Trim63Q38HM4 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim63Q38HM4 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Trim63Q38HM4 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim63Q38HM4 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim63Q38HM4 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim63Q38HM4 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Trim63Q38HM4 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim63Q38HM4 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim63Q38HM4 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim63Q38HM4 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Trim63Q38HM4 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim63Q38HM4 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim63Q38HM4 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Trim63Q38HM4 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim63Q38HM4 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim63Q38HM4 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim63Q38HM4 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim63Q38HM4 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC13.8□□□□□ -0.2
Trim63Q38HM4 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC13.8□□□□□ -0.2
Trim63Q38HM4 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim63Q38HM4 Gm9870-201ENSMUST00000063874 645 ntBASIC13.8□□□□□ -0.2
Trim63Q38HM4 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Trim63Q38HM4 Gm43352-201ENSMUST00000196419 3065 ntBASIC13.8□□□□□ -0.2
Trim63Q38HM4 Asic1-205ENSMUST00000228185 1818 ntBASIC13.8□□□□□ -0.2
Trim63Q38HM4 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim63Q38HM4 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim63Q38HM4 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim63Q38HM4 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim63Q38HM4 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim63Q38HM4 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim63Q38HM4 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Trim63Q38HM4 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.79□□□□□ -0.2
Trim63Q38HM4 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim63Q38HM4 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim63Q38HM4 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim63Q38HM4 Ntrk2-205ENSMUST00000224402 2284 ntBASIC13.79□□□□□ -0.2
Trim63Q38HM4 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Trim63Q38HM4 Gm44616-201ENSMUST00000206417 1732 ntBASIC13.79□□□□□ -0.2
Trim63Q38HM4 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim63Q38HM4 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim63Q38HM4 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Trim63Q38HM4 Gm36858-201ENSMUST00000194501 2391 ntBASIC13.79□□□□□ -0.2
Trim63Q38HM4 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim63Q38HM4 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim63Q38HM4 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Trim63Q38HM4 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim63Q38HM4 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim63Q38HM4 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim63Q38HM4 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Trim63Q38HM4 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim63Q38HM4 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim63Q38HM4 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim63Q38HM4 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim63Q38HM4 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim63Q38HM4 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim63Q38HM4 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim63Q38HM4 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim63Q38HM4 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim63Q38HM4 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim63Q38HM4 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Trim63Q38HM4 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim63Q38HM4 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
Trim63Q38HM4 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim63Q38HM4 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim63Q38HM4 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
Trim63Q38HM4 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Trim63Q38HM4 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim63Q38HM4 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC13.78□□□□□ -0.2
Trim63Q38HM4 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim63Q38HM4 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim63Q38HM4 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Trim63Q38HM4 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
Trim63Q38HM4 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim63Q38HM4 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Trim63Q38HM4 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim63Q38HM4 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.78□□□□□ -0.2
Trim63Q38HM4 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim63Q38HM4 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim63Q38HM4 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Trim63Q38HM4 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim63Q38HM4 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim63Q38HM4 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim63Q38HM4 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.78□□□□□ -0.2
Trim63Q38HM4 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim63Q38HM4 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim63Q38HM4 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms