Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC15.72■□□□□ 0.11
Nkx3-2P97503 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nkx3-2P97503 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nkx3-2P97503 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nkx3-2P97503 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx3-2P97503 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx3-2P97503 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx3-2P97503 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx3-2P97503 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx3-2P97503 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx3-2P97503 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Nkx3-2P97503 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC15.71■□□□□ 0.11
Nkx3-2P97503 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
Nkx3-2P97503 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx3-2P97503 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx3-2P97503 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx3-2P97503 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx3-2P97503 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC15.71■□□□□ 0.11
Nkx3-2P97503 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx3-2P97503 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
Nkx3-2P97503 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx3-2P97503 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx3-2P97503 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx3-2P97503 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx3-2P97503 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx3-2P97503 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx3-2P97503 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx3-2P97503 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx3-2P97503 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.71■□□□□ 0.11
Nkx3-2P97503 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx3-2P97503 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Nkx3-2P97503 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Nkx3-2P97503 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Nkx3-2P97503 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx3-2P97503 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
Nkx3-2P97503 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx3-2P97503 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.7■□□□□ 0.1
Nkx3-2P97503 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx3-2P97503 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC15.7■□□□□ 0.1
Nkx3-2P97503 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Nkx3-2P97503 Gm11860-201ENSMUST00000122346 1010 ntBASIC15.7■□□□□ 0.1
Nkx3-2P97503 Gm27704-201ENSMUST00000185094 107 ntBASIC15.7■□□□□ 0.1
Nkx3-2P97503 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC15.7■□□□□ 0.1
Nkx3-2P97503 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx3-2P97503 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Nkx3-2P97503 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx3-2P97503 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Nkx3-2P97503 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Nkx3-2P97503 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Nkx3-2P97503 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Nkx3-2P97503 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx3-2P97503 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC15.69■□□□□ 0.1
Nkx3-2P97503 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx3-2P97503 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx3-2P97503 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx3-2P97503 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx3-2P97503 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx3-2P97503 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Nkx3-2P97503 Gm7284-201ENSMUST00000131667 944 ntBASIC15.69■□□□□ 0.1
Nkx3-2P97503 Gm27000-201ENSMUST00000182943 842 ntBASIC15.69■□□□□ 0.1
Nkx3-2P97503 Ank2-226ENSMUST00000189368 339 ntBASIC15.69■□□□□ 0.1
Nkx3-2P97503 Gm37722-201ENSMUST00000193757 208 ntBASIC15.69■□□□□ 0.1
Nkx3-2P97503 Gm17808-201ENSMUST00000200859 894 ntBASIC15.69■□□□□ 0.1
Nkx3-2P97503 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC15.69■□□□□ 0.1
Nkx3-2P97503 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC15.69■□□□□ 0.1
Nkx3-2P97503 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx3-2P97503 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx3-2P97503 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx3-2P97503 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx3-2P97503 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx3-2P97503 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Nkx3-2P97503 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Nkx3-2P97503 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Nkx3-2P97503 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx3-2P97503 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx3-2P97503 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx3-2P97503 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.68■□□□□ 0.1
Nkx3-2P97503 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx3-2P97503 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Nkx3-2P97503 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx3-2P97503 Gm11950-201ENSMUST00000121615 838 ntBASIC15.68■□□□□ 0.1
Nkx3-2P97503 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx3-2P97503 AC130713.1-201ENSMUST00000228853 1096 ntBASIC15.68■□□□□ 0.1
Nkx3-2P97503 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx3-2P97503 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.68■□□□□ 0.1
Nkx3-2P97503 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx3-2P97503 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx3-2P97503 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx3-2P97503 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC15.68■□□□□ 0.1
Nkx3-2P97503 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx3-2P97503 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx3-2P97503 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.68■□□□□ 0.1
Nkx3-2P97503 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx3-2P97503 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
Nkx3-2P97503 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx3-2P97503 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx3-2P97503 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx3-2P97503 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Nkx3-2P97503 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Nkx3-2P97503 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms