Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smarcc1P97496 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Smarcc1P97496 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Smarcc1P97496 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smarcc1P97496 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC20.76■□□□□ 0.91
Smarcc1P97496 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smarcc1P97496 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Smarcc1P97496 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smarcc1P97496 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smarcc1P97496 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.76■□□□□ 0.91
Smarcc1P97496 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smarcc1P97496 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smarcc1P97496 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smarcc1P97496 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC20.75■□□□□ 0.91
Smarcc1P97496 Gm5828-201ENSMUST00000071842 1860 ntBASIC20.75■□□□□ 0.91
Smarcc1P97496 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smarcc1P97496 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Smarcc1P97496 AL590614.2-201ENSMUST00000225374 1937 ntBASIC20.75■□□□□ 0.91
Smarcc1P97496 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smarcc1P97496 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC20.75■□□□□ 0.91
Smarcc1P97496 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC20.75■□□□□ 0.91
Smarcc1P97496 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC20.75■□□□□ 0.91
Smarcc1P97496 AC154222.1-201ENSMUST00000223882 475 ntBASIC20.75■□□□□ 0.91
Smarcc1P97496 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Smarcc1P97496 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smarcc1P97496 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smarcc1P97496 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smarcc1P97496 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Smarcc1P97496 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smarcc1P97496 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smarcc1P97496 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smarcc1P97496 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Smarcc1P97496 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smarcc1P97496 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC20.75■□□□□ 0.91
Smarcc1P97496 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smarcc1P97496 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Smarcc1P97496 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC20.74■□□□□ 0.91
Smarcc1P97496 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Smarcc1P97496 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smarcc1P97496 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smarcc1P97496 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smarcc1P97496 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC20.74■□□□□ 0.91
Smarcc1P97496 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smarcc1P97496 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Smarcc1P97496 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Smarcc1P97496 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC20.74■□□□□ 0.91
Smarcc1P97496 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
Smarcc1P97496 AC114585.2-202ENSMUST00000228094 426 ntBASIC20.74■□□□□ 0.91
Smarcc1P97496 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smarcc1P97496 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smarcc1P97496 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Smarcc1P97496 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smarcc1P97496 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Smarcc1P97496 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Smarcc1P97496 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smarcc1P97496 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Smarcc1P97496 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smarcc1P97496 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Smarcc1P97496 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smarcc1P97496 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smarcc1P97496 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smarcc1P97496 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
Smarcc1P97496 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC20.73■□□□□ 0.91
Smarcc1P97496 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smarcc1P97496 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC20.73■□□□□ 0.91
Smarcc1P97496 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Smarcc1P97496 Gm2756-201ENSMUST00000195851 400 ntBASIC20.73■□□□□ 0.91
Smarcc1P97496 AC154621.1-201ENSMUST00000226155 1119 ntBASIC20.73■□□□□ 0.91
Smarcc1P97496 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smarcc1P97496 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smarcc1P97496 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smarcc1P97496 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Smarcc1P97496 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smarcc1P97496 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Smarcc1P97496 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smarcc1P97496 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC20.73■□□□□ 0.91
Smarcc1P97496 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smarcc1P97496 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smarcc1P97496 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smarcc1P97496 Tfap2a-209ENSMUST00000225180 1828 ntBASIC20.72■□□□□ 0.91
Smarcc1P97496 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Smarcc1P97496 Gm14494-201ENSMUST00000118786 435 ntBASIC20.72■□□□□ 0.91
Smarcc1P97496 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC20.72■□□□□ 0.91
Smarcc1P97496 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smarcc1P97496 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC20.72■□□□□ 0.91
Smarcc1P97496 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC20.72■□□□□ 0.91
Smarcc1P97496 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smarcc1P97496 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smarcc1P97496 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smarcc1P97496 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smarcc1P97496 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smarcc1P97496 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smarcc1P97496 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Smarcc1P97496 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
Smarcc1P97496 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smarcc1P97496 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
Smarcc1P97496 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smarcc1P97496 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smarcc1P97496 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smarcc1P97496 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms