Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm6P62313 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm6P62313 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm6P62313 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm6P62313 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC14.57□□□□□ -0.08
Lsm6P62313 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC14.57□□□□□ -0.08
Lsm6P62313 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC14.57□□□□□ -0.08
Lsm6P62313 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC14.57□□□□□ -0.08
Lsm6P62313 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm6P62313 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm6P62313 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.57□□□□□ -0.08
Lsm6P62313 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm6P62313 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm6P62313 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm6P62313 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm6P62313 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Lsm6P62313 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Lsm6P62313 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm6P62313 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Lsm6P62313 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm6P62313 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm6P62313 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.57□□□□□ -0.08
Lsm6P62313 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm6P62313 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm6P62313 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Lsm6P62313 Actl10-202ENSMUST00000226583 1501 ntBASIC14.56□□□□□ -0.08
Lsm6P62313 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm6P62313 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
Lsm6P62313 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm6P62313 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm6P62313 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm6P62313 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm6P62313 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC14.56□□□□□ -0.08
Lsm6P62313 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm6P62313 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm6P62313 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Lsm6P62313 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm6P62313 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Lsm6P62313 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm6P62313 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Lsm6P62313 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm6P62313 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm6P62313 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm6P62313 Gm29994-201ENSMUST00000195495 1193 ntBASIC14.56□□□□□ -0.08
Lsm6P62313 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm6P62313 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm6P62313 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm6P62313 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm6P62313 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm6P62313 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Lsm6P62313 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm6P62313 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm6P62313 Gm26596-201ENSMUST00000180464 2655 ntBASIC14.56□□□□□ -0.08
Lsm6P62313 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Lsm6P62313 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm6P62313 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Lsm6P62313 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm6P62313 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm6P62313 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Lsm6P62313 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm6P62313 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm6P62313 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm6P62313 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm6P62313 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Lsm6P62313 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm6P62313 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Lsm6P62313 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC14.55□□□□□ -0.08
Lsm6P62313 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm6P62313 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm6P62313 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm6P62313 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm6P62313 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC14.55□□□□□ -0.08
Lsm6P62313 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm6P62313 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm6P62313 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm6P62313 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm6P62313 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Lsm6P62313 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm6P62313 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm6P62313 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm6P62313 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Lsm6P62313 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm6P62313 CT010478.1-201ENSMUST00000220747 2787 ntBASIC14.54□□□□□ -0.08
Lsm6P62313 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm6P62313 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm6P62313 Gm7213-201ENSMUST00000215977 950 ntBASIC14.54□□□□□ -0.08
Lsm6P62313 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm6P62313 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm6P62313 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Lsm6P62313 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Lsm6P62313 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm6P62313 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm6P62313 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.54□□□□□ -0.08
Lsm6P62313 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Lsm6P62313 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Lsm6P62313 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm6P62313 Phf7-203ENSMUST00000226565 1971 ntBASIC14.54□□□□□ -0.08
Lsm6P62313 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Lsm6P62313 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
Lsm6P62313 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms