Protein–RNA interactions for Protein: P57748

Mmp20, Matrix metalloproteinase-20, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp20P57748 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Mmp20P57748 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Mmp20P57748 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Mmp20P57748 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
Mmp20P57748 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC19.01■□□□□ 0.63
Mmp20P57748 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Mmp20P57748 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.01■□□□□ 0.63
Mmp20P57748 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Mmp20P57748 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Mmp20P57748 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Mmp20P57748 Gm43808-201ENSMUST00000202534 2065 ntBASIC19.01■□□□□ 0.63
Mmp20P57748 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Mmp20P57748 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Mmp20P57748 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC19■□□□□ 0.63
Mmp20P57748 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Mmp20P57748 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Mmp20P57748 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Mmp20P57748 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
Mmp20P57748 Gm4535-201ENSMUST00000182274 558 ntBASIC19■□□□□ 0.63
Mmp20P57748 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC19■□□□□ 0.63
Mmp20P57748 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Mmp20P57748 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Mmp20P57748 Gm10355-201ENSMUST00000097146 517 ntBASIC19■□□□□ 0.63
Mmp20P57748 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Mmp20P57748 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Mmp20P57748 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Mmp20P57748 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19■□□□□ 0.63
Mmp20P57748 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Mmp20P57748 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19■□□□□ 0.63
Mmp20P57748 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Mmp20P57748 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Mmp20P57748 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Mmp20P57748 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
Mmp20P57748 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.99■□□□□ 0.63
Mmp20P57748 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Mmp20P57748 Gm11779-201ENSMUST00000118541 368 ntBASIC18.99■□□□□ 0.63
Mmp20P57748 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC18.99■□□□□ 0.63
Mmp20P57748 Gm7230-201ENSMUST00000173026 815 ntBASIC18.99■□□□□ 0.63
Mmp20P57748 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC18.99■□□□□ 0.63
Mmp20P57748 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Mmp20P57748 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Mmp20P57748 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Mmp20P57748 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Mmp20P57748 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Mmp20P57748 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Mmp20P57748 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Mmp20P57748 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Mmp20P57748 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Mmp20P57748 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Mmp20P57748 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Mmp20P57748 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Mmp20P57748 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Mmp20P57748 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
Mmp20P57748 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Mmp20P57748 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Mmp20P57748 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC18.98■□□□□ 0.63
Mmp20P57748 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC18.98■□□□□ 0.63
Mmp20P57748 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Mmp20P57748 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC18.98■□□□□ 0.63
Mmp20P57748 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Mmp20P57748 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Mmp20P57748 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Mmp20P57748 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Mmp20P57748 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Mmp20P57748 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.98■□□□□ 0.63
Mmp20P57748 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
Mmp20P57748 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Mmp20P57748 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Mmp20P57748 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Mmp20P57748 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Mmp20P57748 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Mmp20P57748 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC18.97■□□□□ 0.63
Mmp20P57748 Gm7507-201ENSMUST00000183053 1008 ntBASIC18.97■□□□□ 0.63
Mmp20P57748 Gm5264-201ENSMUST00000190584 848 ntBASIC18.97■□□□□ 0.63
Mmp20P57748 Gm2213-201ENSMUST00000197485 688 ntBASIC18.97■□□□□ 0.63
Mmp20P57748 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC18.97■□□□□ 0.63
Mmp20P57748 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC18.97■□□□□ 0.63
Mmp20P57748 Psmb5-202ENSMUST00000227257 622 ntBASIC18.97■□□□□ 0.63
Mmp20P57748 AC159093.1-201ENSMUST00000227779 380 ntBASIC18.97■□□□□ 0.63
Mmp20P57748 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.97■□□□□ 0.63
Mmp20P57748 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Mmp20P57748 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Mmp20P57748 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Mmp20P57748 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Mmp20P57748 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Mmp20P57748 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Mmp20P57748 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.96■□□□□ 0.63
Mmp20P57748 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Mmp20P57748 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Mmp20P57748 Gm15173-201ENSMUST00000122049 433 ntBASIC18.96■□□□□ 0.63
Mmp20P57748 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
Mmp20P57748 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Mmp20P57748 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC18.96■□□□□ 0.63
Mmp20P57748 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.96■□□□□ 0.63
Mmp20P57748 AC107711.5-202ENSMUST00000226429 702 ntBASIC18.96■□□□□ 0.63
Mmp20P57748 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Mmp20P57748 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Mmp20P57748 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Mmp20P57748 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Mmp20P57748 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms