Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Msh6P54276 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Msh6P54276 Gm15442-201ENSMUST00000117905 1527 ntBASIC21.06■□□□□ 0.96
Msh6P54276 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Msh6P54276 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Msh6P54276 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Msh6P54276 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Msh6P54276 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC21.05■□□□□ 0.96
Msh6P54276 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Msh6P54276 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Msh6P54276 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Msh6P54276 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Msh6P54276 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC21.05■□□□□ 0.96
Msh6P54276 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC21.05■□□□□ 0.96
Msh6P54276 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC21.05■□□□□ 0.96
Msh6P54276 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Msh6P54276 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Msh6P54276 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Msh6P54276 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Msh6P54276 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Msh6P54276 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Msh6P54276 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Msh6P54276 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Msh6P54276 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Msh6P54276 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Msh6P54276 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Msh6P54276 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Msh6P54276 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC21.04■□□□□ 0.96
Msh6P54276 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Msh6P54276 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Msh6P54276 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC21.04■□□□□ 0.96
Msh6P54276 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Msh6P54276 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Msh6P54276 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Msh6P54276 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Msh6P54276 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Msh6P54276 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Msh6P54276 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Msh6P54276 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Msh6P54276 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC21.03■□□□□ 0.96
Msh6P54276 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Msh6P54276 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Msh6P54276 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC21.03■□□□□ 0.96
Msh6P54276 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC21.03■□□□□ 0.96
Msh6P54276 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Msh6P54276 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC21.02■□□□□ 0.96
Msh6P54276 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Msh6P54276 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Msh6P54276 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Msh6P54276 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC21.02■□□□□ 0.96
Msh6P54276 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC21.02■□□□□ 0.96
Msh6P54276 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Msh6P54276 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Msh6P54276 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Msh6P54276 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Msh6P54276 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Msh6P54276 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
Msh6P54276 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Msh6P54276 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
Msh6P54276 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC21.01■□□□□ 0.95
Msh6P54276 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Msh6P54276 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC21.01■□□□□ 0.95
Msh6P54276 Gm8000-201ENSMUST00000188378 592 ntBASIC21.01■□□□□ 0.95
Msh6P54276 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Msh6P54276 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Msh6P54276 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Msh6P54276 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Msh6P54276 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Msh6P54276 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Msh6P54276 Gm16401-202ENSMUST00000197463 2074 ntBASIC21.01■□□□□ 0.95
Msh6P54276 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Msh6P54276 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Msh6P54276 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Msh6P54276 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Msh6P54276 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Msh6P54276 Mir5126-201ENSMUST00000175513 77 ntBASIC21■□□□□ 0.95
Msh6P54276 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC21■□□□□ 0.95
Msh6P54276 Gm43332-201ENSMUST00000202511 1044 ntBASIC21■□□□□ 0.95
Msh6P54276 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Msh6P54276 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Msh6P54276 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Msh6P54276 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Msh6P54276 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Msh6P54276 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Msh6P54276 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
Msh6P54276 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Msh6P54276 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Msh6P54276 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC21■□□□□ 0.95
Msh6P54276 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Msh6P54276 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Msh6P54276 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Msh6P54276 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Msh6P54276 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Msh6P54276 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Msh6P54276 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC20.99■□□□□ 0.95
Msh6P54276 Gm44430-201ENSMUST00000203376 995 ntBASIC20.99■□□□□ 0.95
Msh6P54276 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Msh6P54276 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Msh6P54276 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Msh6P54276 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms