Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Atxn1P54254 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Atxn1P54254 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Atxn1P54254 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Atxn1P54254 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Atxn1P54254 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Atxn1P54254 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Atxn1P54254 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Atxn1P54254 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Atxn1P54254 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Atxn1P54254 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.47■□□□□ 0.23
Atxn1P54254 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Atxn1P54254 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC16.47■□□□□ 0.23
Atxn1P54254 Gm6376-201ENSMUST00000209407 580 ntBASIC16.47■□□□□ 0.23
Atxn1P54254 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Atxn1P54254 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Atxn1P54254 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Atxn1P54254 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Atxn1P54254 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Atxn1P54254 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Atxn1P54254 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Atxn1P54254 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Atxn1P54254 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Atxn1P54254 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Atxn1P54254 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Atxn1P54254 Idnk-204ENSMUST00000226010 1898 ntBASIC16.46■□□□□ 0.23
Atxn1P54254 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atxn1P54254 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Atxn1P54254 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atxn1P54254 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.46■□□□□ 0.23
Atxn1P54254 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atxn1P54254 Gm7862-201ENSMUST00000121461 292 ntBASIC16.46■□□□□ 0.23
Atxn1P54254 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.46■□□□□ 0.23
Atxn1P54254 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC16.46■□□□□ 0.23
Atxn1P54254 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC16.46■□□□□ 0.23
Atxn1P54254 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC16.46■□□□□ 0.23
Atxn1P54254 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Atxn1P54254 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC16.46■□□□□ 0.23
Atxn1P54254 Gm10576-201ENSMUST00000191927 825 ntBASIC16.46■□□□□ 0.23
Atxn1P54254 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Atxn1P54254 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atxn1P54254 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atxn1P54254 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atxn1P54254 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.46■□□□□ 0.23
Atxn1P54254 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Atxn1P54254 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atxn1P54254 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atxn1P54254 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Atxn1P54254 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Atxn1P54254 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atxn1P54254 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atxn1P54254 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Atxn1P54254 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Atxn1P54254 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atxn1P54254 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atxn1P54254 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atxn1P54254 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Atxn1P54254 Gm11779-201ENSMUST00000118541 368 ntBASIC16.45■□□□□ 0.22
Atxn1P54254 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC16.45■□□□□ 0.22
Atxn1P54254 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atxn1P54254 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Atxn1P54254 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atxn1P54254 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atxn1P54254 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atxn1P54254 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atxn1P54254 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atxn1P54254 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Atxn1P54254 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atxn1P54254 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Atxn1P54254 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.45■□□□□ 0.22
Atxn1P54254 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atxn1P54254 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Atxn1P54254 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atxn1P54254 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atxn1P54254 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atxn1P54254 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.45■□□□□ 0.22
Atxn1P54254 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Atxn1P54254 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Atxn1P54254 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Atxn1P54254 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Atxn1P54254 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Atxn1P54254 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Atxn1P54254 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.44■□□□□ 0.22
Atxn1P54254 Gm6296-201ENSMUST00000222599 943 ntBASIC16.44■□□□□ 0.22
Atxn1P54254 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Atxn1P54254 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.44■□□□□ 0.22
Atxn1P54254 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Atxn1P54254 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Atxn1P54254 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.44■□□□□ 0.22
Atxn1P54254 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Atxn1P54254 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Atxn1P54254 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Atxn1P54254 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Atxn1P54254 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Atxn1P54254 AC131586.3-201ENSMUST00000228355 1367 ntBASIC16.43■□□□□ 0.22
Atxn1P54254 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Atxn1P54254 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Atxn1P54254 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Atxn1P54254 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Atxn1P54254 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms