Protein–RNA interactions for Protein: P47963

Rpl13, 60S ribosomal protein L13, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl13P47963 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Rpl13P47963 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rpl13P47963 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rpl13P47963 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Rpl13P47963 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.19■□□□□ 0.5
Rpl13P47963 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rpl13P47963 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rpl13P47963 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rpl13P47963 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.19■□□□□ 0.5
Rpl13P47963 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rpl13P47963 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rpl13P47963 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rpl13P47963 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rpl13P47963 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rpl13P47963 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rpl13P47963 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rpl13P47963 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rpl13P47963 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rpl13P47963 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rpl13P47963 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rpl13P47963 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Rpl13P47963 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.18■□□□□ 0.5
Rpl13P47963 Gm43799-201ENSMUST00000201845 579 ntBASIC18.18■□□□□ 0.5
Rpl13P47963 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.18■□□□□ 0.5
Rpl13P47963 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rpl13P47963 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.18■□□□□ 0.5
Rpl13P47963 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rpl13P47963 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rpl13P47963 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rpl13P47963 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rpl13P47963 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rpl13P47963 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rpl13P47963 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rpl13P47963 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rpl13P47963 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rpl13P47963 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rpl13P47963 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rpl13P47963 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rpl13P47963 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rpl13P47963 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Rpl13P47963 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.17■□□□□ 0.5
Rpl13P47963 Gm7213-201ENSMUST00000215977 950 ntBASIC18.17■□□□□ 0.5
Rpl13P47963 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rpl13P47963 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rpl13P47963 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rpl13P47963 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC18.17■□□□□ 0.5
Rpl13P47963 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rpl13P47963 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rpl13P47963 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Rpl13P47963 Actl10-202ENSMUST00000226583 1501 ntBASIC18.17■□□□□ 0.5
Rpl13P47963 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rpl13P47963 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Rpl13P47963 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rpl13P47963 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rpl13P47963 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rpl13P47963 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpl13P47963 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpl13P47963 Gm26596-201ENSMUST00000180464 2655 ntBASIC18.16■□□□□ 0.5
Rpl13P47963 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpl13P47963 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpl13P47963 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpl13P47963 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpl13P47963 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.16■□□□□ 0.5
Rpl13P47963 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.16■□□□□ 0.5
Rpl13P47963 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.16■□□□□ 0.5
Rpl13P47963 Mir5130-201ENSMUST00000175160 84 ntBASIC18.16■□□□□ 0.5
Rpl13P47963 Mir6982-201ENSMUST00000184354 68 ntBASIC18.16■□□□□ 0.5
Rpl13P47963 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC18.16■□□□□ 0.5
Rpl13P47963 Gm18115-201ENSMUST00000221209 621 ntBASIC18.16■□□□□ 0.5
Rpl13P47963 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpl13P47963 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpl13P47963 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Rpl13P47963 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpl13P47963 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpl13P47963 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Rpl13P47963 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpl13P47963 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpl13P47963 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpl13P47963 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpl13P47963 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpl13P47963 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpl13P47963 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpl13P47963 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rpl13P47963 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpl13P47963 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC18.15■□□□□ 0.5
Rpl13P47963 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpl13P47963 Gm7889-201ENSMUST00000185591 958 ntBASIC18.15■□□□□ 0.5
Rpl13P47963 Gm45058-201ENSMUST00000205810 766 ntBASIC18.15■□□□□ 0.5
Rpl13P47963 Gm18959-201ENSMUST00000208954 655 ntBASIC18.15■□□□□ 0.5
Rpl13P47963 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpl13P47963 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpl13P47963 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpl13P47963 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
Rpl13P47963 Phf7-203ENSMUST00000226565 1971 ntBASIC18.15■□□□□ 0.5
Rpl13P47963 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rpl13P47963 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rpl13P47963 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpl13P47963 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpl13P47963 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rpl13P47963 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms