Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Slc6a1P31648 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Slc6a1P31648 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Slc6a1P31648 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Slc6a1P31648 Gm8520-201ENSMUST00000186517 868 ntBASIC14.36□□□□□ -0.11
Slc6a1P31648 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Slc6a1P31648 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Slc6a1P31648 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC14.36□□□□□ -0.11
Slc6a1P31648 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Slc6a1P31648 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Slc6a1P31648 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Slc6a1P31648 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Slc6a1P31648 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Slc6a1P31648 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Slc6a1P31648 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Slc6a1P31648 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Slc6a1P31648 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Slc6a1P31648 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Slc6a1P31648 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Slc6a1P31648 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Slc6a1P31648 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Slc6a1P31648 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC14.35□□□□□ -0.11
Slc6a1P31648 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC14.35□□□□□ -0.11
Slc6a1P31648 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Slc6a1P31648 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Slc6a1P31648 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC14.35□□□□□ -0.11
Slc6a1P31648 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Slc6a1P31648 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC14.35□□□□□ -0.11
Slc6a1P31648 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Slc6a1P31648 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Slc6a1P31648 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC14.34□□□□□ -0.11
Slc6a1P31648 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Slc6a1P31648 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Slc6a1P31648 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Slc6a1P31648 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Slc6a1P31648 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Slc6a1P31648 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Slc6a1P31648 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Slc6a1P31648 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Slc6a1P31648 Gm10418-201ENSMUST00000100943 576 ntBASIC14.34□□□□□ -0.11
Slc6a1P31648 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC14.34□□□□□ -0.11
Slc6a1P31648 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Slc6a1P31648 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Slc6a1P31648 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Slc6a1P31648 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Slc6a1P31648 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Slc6a1P31648 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Slc6a1P31648 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Slc6a1P31648 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Slc6a1P31648 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.34□□□□□ -0.11
Slc6a1P31648 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Slc6a1P31648 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Slc6a1P31648 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Slc6a1P31648 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.11
Slc6a1P31648 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Slc6a1P31648 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Slc6a1P31648 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Slc6a1P31648 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Slc6a1P31648 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Slc6a1P31648 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Slc6a1P31648 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Slc6a1P31648 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.33□□□□□ -0.12
Slc6a1P31648 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Slc6a1P31648 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC14.33□□□□□ -0.12
Slc6a1P31648 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Slc6a1P31648 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Slc6a1P31648 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Slc6a1P31648 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Slc6a1P31648 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Slc6a1P31648 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Slc6a1P31648 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC14.33□□□□□ -0.12
Slc6a1P31648 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Slc6a1P31648 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Slc6a1P31648 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Slc6a1P31648 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Slc6a1P31648 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Slc6a1P31648 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Slc6a1P31648 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Slc6a1P31648 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Slc6a1P31648 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Slc6a1P31648 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Slc6a1P31648 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Slc6a1P31648 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Slc6a1P31648 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Slc6a1P31648 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.32□□□□□ -0.12
Slc6a1P31648 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Slc6a1P31648 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Slc6a1P31648 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Slc6a1P31648 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Slc6a1P31648 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Slc6a1P31648 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Slc6a1P31648 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Slc6a1P31648 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC14.32□□□□□ -0.12
Slc6a1P31648 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC14.32□□□□□ -0.12
Slc6a1P31648 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Slc6a1P31648 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC14.32□□□□□ -0.12
Slc6a1P31648 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC14.32□□□□□ -0.12
Slc6a1P31648 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Slc6a1P31648 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Slc6a1P31648 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms