Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Gm28659-201ENSMUST00000188013 759 ntBASIC17.79■□□□□ 0.44
Mmp3P28862 AC164629.2-201ENSMUST00000217916 270 ntBASIC17.79■□□□□ 0.44
Mmp3P28862 Mzt1-203ENSMUST00000227948 952 ntBASIC17.79■□□□□ 0.44
Mmp3P28862 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Mmp3P28862 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Mmp3P28862 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Mmp3P28862 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Mmp3P28862 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Mmp3P28862 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.79■□□□□ 0.44
Mmp3P28862 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Mmp3P28862 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Mmp3P28862 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Mmp3P28862 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Mmp3P28862 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Mmp3P28862 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Mmp3P28862 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Mmp3P28862 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Mmp3P28862 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC17.78■□□□□ 0.44
Mmp3P28862 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17.78■□□□□ 0.44
Mmp3P28862 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Mmp3P28862 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Mmp3P28862 Gm5864-201ENSMUST00000202263 970 ntBASIC17.78■□□□□ 0.44
Mmp3P28862 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC17.78■□□□□ 0.44
Mmp3P28862 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.78■□□□□ 0.44
Mmp3P28862 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Mmp3P28862 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Mmp3P28862 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Mmp3P28862 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Mmp3P28862 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Mmp3P28862 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.77■□□□□ 0.44
Mmp3P28862 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Mmp3P28862 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Mmp3P28862 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
Mmp3P28862 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Mmp3P28862 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Mmp3P28862 Gm13884-201ENSMUST00000118103 829 ntBASIC17.77■□□□□ 0.44
Mmp3P28862 Gm12644-201ENSMUST00000119935 606 ntBASIC17.77■□□□□ 0.44
Mmp3P28862 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Mmp3P28862 Mir8098-201ENSMUST00000184011 137 ntBASIC17.77■□□□□ 0.44
Mmp3P28862 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Mmp3P28862 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Mmp3P28862 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
Mmp3P28862 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Mmp3P28862 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Mmp3P28862 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Mmp3P28862 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Mmp3P28862 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.76■□□□□ 0.43
Mmp3P28862 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Mmp3P28862 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Mmp3P28862 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Mmp3P28862 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Mmp3P28862 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Mmp3P28862 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC17.76■□□□□ 0.43
Mmp3P28862 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Mmp3P28862 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Mmp3P28862 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Mmp3P28862 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.76■□□□□ 0.43
Mmp3P28862 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Mmp3P28862 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Mmp3P28862 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Mmp3P28862 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Mmp3P28862 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.76■□□□□ 0.43
Mmp3P28862 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Mmp3P28862 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Mmp3P28862 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Mmp3P28862 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.75■□□□□ 0.43
Mmp3P28862 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.75■□□□□ 0.43
Mmp3P28862 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Mmp3P28862 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Mmp3P28862 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Mmp3P28862 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.75■□□□□ 0.43
Mmp3P28862 Gm27867-201ENSMUST00000184778 125 ntBASIC17.75■□□□□ 0.43
Mmp3P28862 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC17.75■□□□□ 0.43
Mmp3P28862 AC159301.1-201ENSMUST00000225130 1182 ntBASIC17.75■□□□□ 0.43
Mmp3P28862 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Mmp3P28862 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Mmp3P28862 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Mmp3P28862 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Mmp3P28862 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Mmp3P28862 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Mmp3P28862 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Mmp3P28862 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Mmp3P28862 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mmp3P28862 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mmp3P28862 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mmp3P28862 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mmp3P28862 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mmp3P28862 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
Mmp3P28862 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC17.74■□□□□ 0.43
Mmp3P28862 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.74■□□□□ 0.43
Mmp3P28862 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mmp3P28862 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.74■□□□□ 0.43
Mmp3P28862 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC17.74■□□□□ 0.43
Mmp3P28862 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mmp3P28862 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Mmp3P28862 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mmp3P28862 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.74■□□□□ 0.43
Mmp3P28862 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Mmp3P28862 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Mmp3P28862 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms