Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nckap1P28660 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.54■□□□□ 0.24
Nckap1P28660 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nckap1P28660 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nckap1P28660 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.54■□□□□ 0.24
Nckap1P28660 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Nckap1P28660 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nckap1P28660 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Nckap1P28660 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nckap1P28660 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.54■□□□□ 0.24
Nckap1P28660 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nckap1P28660 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nckap1P28660 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.54■□□□□ 0.24
Nckap1P28660 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Nckap1P28660 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.54■□□□□ 0.24
Nckap1P28660 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.54■□□□□ 0.24
Nckap1P28660 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nckap1P28660 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nckap1P28660 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nckap1P28660 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nckap1P28660 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nckap1P28660 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Nckap1P28660 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nckap1P28660 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nckap1P28660 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nckap1P28660 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Nckap1P28660 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nckap1P28660 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.53■□□□□ 0.24
Nckap1P28660 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.53■□□□□ 0.24
Nckap1P28660 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.53■□□□□ 0.24
Nckap1P28660 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.53■□□□□ 0.24
Nckap1P28660 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.53■□□□□ 0.24
Nckap1P28660 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.53■□□□□ 0.24
Nckap1P28660 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.53■□□□□ 0.24
Nckap1P28660 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nckap1P28660 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nckap1P28660 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.53■□□□□ 0.24
Nckap1P28660 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nckap1P28660 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nckap1P28660 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Nckap1P28660 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nckap1P28660 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Nckap1P28660 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.53■□□□□ 0.24
Nckap1P28660 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nckap1P28660 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nckap1P28660 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nckap1P28660 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nckap1P28660 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Nckap1P28660 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Nckap1P28660 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.52■□□□□ 0.24
Nckap1P28660 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nckap1P28660 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.52■□□□□ 0.24
Nckap1P28660 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nckap1P28660 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.52■□□□□ 0.24
Nckap1P28660 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nckap1P28660 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nckap1P28660 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nckap1P28660 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nckap1P28660 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nckap1P28660 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.23
Nckap1P28660 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nckap1P28660 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nckap1P28660 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nckap1P28660 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Nckap1P28660 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nckap1P28660 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nckap1P28660 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nckap1P28660 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nckap1P28660 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nckap1P28660 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Nckap1P28660 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.51■□□□□ 0.23
Nckap1P28660 Gm12895-201ENSMUST00000122214 226 ntBASIC16.51■□□□□ 0.23
Nckap1P28660 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Nckap1P28660 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.51■□□□□ 0.23
Nckap1P28660 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.51■□□□□ 0.23
Nckap1P28660 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.51■□□□□ 0.23
Nckap1P28660 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Nckap1P28660 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nckap1P28660 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nckap1P28660 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nckap1P28660 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nckap1P28660 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nckap1P28660 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Nckap1P28660 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nckap1P28660 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nckap1P28660 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Nckap1P28660 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nckap1P28660 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Nckap1P28660 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Nckap1P28660 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Nckap1P28660 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nckap1P28660 Birc2-201ENSMUST00000054878 378 ntBASIC16.5■□□□□ 0.23
Nckap1P28660 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Nckap1P28660 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nckap1P28660 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.5■□□□□ 0.23
Nckap1P28660 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nckap1P28660 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Nckap1P28660 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Nckap1P28660 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nckap1P28660 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms