Protein–RNA interactions for Protein: P15379

Cd44, CD44 antigen, mousemouse

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44P15379 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cd44P15379 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC17.48■□□□□ 0.39
Cd44P15379 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.48■□□□□ 0.39
Cd44P15379 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
Cd44P15379 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd44P15379 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd44P15379 Gm19430-201ENSMUST00000193847 2137 ntBASIC17.47■□□□□ 0.39
Cd44P15379 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd44P15379 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd44P15379 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd44P15379 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Cd44P15379 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Cd44P15379 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cd44P15379 Mir1199-201ENSMUST00000117015 119 ntBASIC17.47■□□□□ 0.39
Cd44P15379 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.47■□□□□ 0.39
Cd44P15379 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.47■□□□□ 0.39
Cd44P15379 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cd44P15379 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Cd44P15379 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd44P15379 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cd44P15379 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd44P15379 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd44P15379 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd44P15379 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd44P15379 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cd44P15379 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd44P15379 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cd44P15379 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cd44P15379 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cd44P15379 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cd44P15379 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cd44P15379 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cd44P15379 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cd44P15379 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cd44P15379 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cd44P15379 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cd44P15379 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cd44P15379 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cd44P15379 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cd44P15379 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cd44P15379 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.46■□□□□ 0.39
Cd44P15379 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.46■□□□□ 0.39
Cd44P15379 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cd44P15379 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Cd44P15379 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Cd44P15379 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cd44P15379 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cd44P15379 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cd44P15379 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cd44P15379 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cd44P15379 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cd44P15379 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Cd44P15379 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
Cd44P15379 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Cd44P15379 Gm16011-201ENSMUST00000121567 2662 ntBASIC17.45■□□□□ 0.38
Cd44P15379 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cd44P15379 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cd44P15379 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.45■□□□□ 0.38
Cd44P15379 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.45■□□□□ 0.38
Cd44P15379 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cd44P15379 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Cd44P15379 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Cd44P15379 Gm18958-201ENSMUST00000174258 762 ntBASIC17.45■□□□□ 0.38
Cd44P15379 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cd44P15379 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.45■□□□□ 0.38
Cd44P15379 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cd44P15379 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cd44P15379 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Cd44P15379 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Cd44P15379 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cd44P15379 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cd44P15379 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cd44P15379 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Cd44P15379 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cd44P15379 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.44■□□□□ 0.38
Cd44P15379 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cd44P15379 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cd44P15379 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cd44P15379 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.44■□□□□ 0.38
Cd44P15379 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.44■□□□□ 0.38
Cd44P15379 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cd44P15379 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Cd44P15379 Gm43072-201ENSMUST00000200283 1671 ntBASIC17.44■□□□□ 0.38
Cd44P15379 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cd44P15379 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cd44P15379 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cd44P15379 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.44■□□□□ 0.38
Cd44P15379 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cd44P15379 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cd44P15379 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cd44P15379 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cd44P15379 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.43■□□□□ 0.38
Cd44P15379 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cd44P15379 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cd44P15379 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Cd44P15379 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Cd44P15379 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cd44P15379 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.43■□□□□ 0.38
Cd44P15379 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cd44P15379 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms