Protein–RNA interactions for Protein: P04940

Ig kappa chain V-VI region NQ2-17.4.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04940 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
P04940 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
P04940 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
P04940 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
P04940 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
P04940 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
P04940 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC13.49□□□□□ -0.25
P04940 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
P04940 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC13.49□□□□□ -0.25
P04940 Gm29707-201ENSMUST00000196325 491 ntBASIC13.49□□□□□ -0.25
P04940 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
P04940 Gm18421-201ENSMUST00000204122 625 ntBASIC13.49□□□□□ -0.25
P04940 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
P04940 AC153881.2-201ENSMUST00000214877 204 ntBASIC13.49□□□□□ -0.25
P04940 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
P04940 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
P04940 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
P04940 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
P04940 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
P04940 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
P04940 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
P04940 Ddx41-204ENSMUST00000224765 2199 ntBASIC13.49□□□□□ -0.25
P04940 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
P04940 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
P04940 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
P04940 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC13.49□□□□□ -0.25
P04940 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
P04940 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
P04940 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
P04940 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
P04940 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
P04940 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
P04940 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
P04940 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
P04940 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
P04940 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
P04940 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
P04940 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
P04940 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
P04940 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
P04940 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC13.48□□□□□ -0.25
P04940 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC13.48□□□□□ -0.25
P04940 Gm11336-201ENSMUST00000118168 334 ntBASIC13.48□□□□□ -0.25
P04940 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC13.48□□□□□ -0.25
P04940 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
P04940 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
P04940 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
P04940 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
P04940 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
P04940 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
P04940 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
P04940 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
P04940 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
P04940 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
P04940 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
P04940 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
P04940 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
P04940 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
P04940 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
P04940 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
P04940 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
P04940 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
P04940 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
P04940 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
P04940 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
P04940 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
P04940 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
P04940 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
P04940 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
P04940 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
P04940 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
P04940 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
P04940 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
P04940 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
P04940 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
P04940 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
P04940 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
P04940 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
P04940 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
P04940 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
P04940 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
P04940 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC13.47□□□□□ -0.25
P04940 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC13.46□□□□□ -0.25
P04940 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
P04940 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
P04940 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
P04940 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
P04940 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
P04940 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
P04940 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
P04940 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
P04940 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
P04940 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
P04940 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC13.46□□□□□ -0.25
P04940 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
P04940 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
P04940 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
P04940 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
P04940 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
P04940 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms