Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sh2d1aO88890 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC11.78□□□□□ -0.52
Sh2d1aO88890 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Sh2d1aO88890 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sh2d1aO88890 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sh2d1aO88890 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Sh2d1aO88890 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sh2d1aO88890 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sh2d1aO88890 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sh2d1aO88890 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Sh2d1aO88890 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sh2d1aO88890 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Sh2d1aO88890 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sh2d1aO88890 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sh2d1aO88890 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC11.78□□□□□ -0.52
Sh2d1aO88890 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sh2d1aO88890 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Sh2d1aO88890 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sh2d1aO88890 AC175538.1-201ENSMUST00000225343 1269 ntBASIC11.78□□□□□ -0.52
Sh2d1aO88890 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sh2d1aO88890 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sh2d1aO88890 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sh2d1aO88890 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sh2d1aO88890 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sh2d1aO88890 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Sh2d1aO88890 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Sh2d1aO88890 CT010478.1-201ENSMUST00000220747 2787 ntBASIC11.78□□□□□ -0.52
Sh2d1aO88890 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sh2d1aO88890 Gm11841-201ENSMUST00000117060 1963 ntBASIC11.78□□□□□ -0.52
Sh2d1aO88890 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
Sh2d1aO88890 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sh2d1aO88890 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sh2d1aO88890 Cxcl14-202ENSMUST00000224801 1467 ntBASIC11.77□□□□□ -0.52
Sh2d1aO88890 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC11.77□□□□□ -0.52
Sh2d1aO88890 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sh2d1aO88890 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sh2d1aO88890 Gm11620-201ENSMUST00000118770 1845 ntBASIC11.77□□□□□ -0.52
Sh2d1aO88890 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sh2d1aO88890 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sh2d1aO88890 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Sh2d1aO88890 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sh2d1aO88890 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sh2d1aO88890 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC11.77□□□□□ -0.53
Sh2d1aO88890 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sh2d1aO88890 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sh2d1aO88890 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC11.77□□□□□ -0.53
Sh2d1aO88890 Gm37025-201ENSMUST00000195159 829 ntBASIC11.77□□□□□ -0.53
Sh2d1aO88890 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC11.77□□□□□ -0.53
Sh2d1aO88890 Arhgef33-211ENSMUST00000225658 473 ntBASIC11.77□□□□□ -0.53
Sh2d1aO88890 Otx2os1-204ENSMUST00000227221 751 ntBASIC11.77□□□□□ -0.53
Sh2d1aO88890 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sh2d1aO88890 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sh2d1aO88890 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sh2d1aO88890 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Sh2d1aO88890 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sh2d1aO88890 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sh2d1aO88890 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sh2d1aO88890 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sh2d1aO88890 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Sh2d1aO88890 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sh2d1aO88890 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sh2d1aO88890 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Sh2d1aO88890 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sh2d1aO88890 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sh2d1aO88890 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sh2d1aO88890 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Sh2d1aO88890 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sh2d1aO88890 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Sh2d1aO88890 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC11.76□□□□□ -0.53
Sh2d1aO88890 Gm28265-201ENSMUST00000188201 2319 ntBASIC11.76□□□□□ -0.53
Sh2d1aO88890 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Sh2d1aO88890 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sh2d1aO88890 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sh2d1aO88890 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sh2d1aO88890 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC11.76□□□□□ -0.53
Sh2d1aO88890 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC11.76□□□□□ -0.53
Sh2d1aO88890 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sh2d1aO88890 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sh2d1aO88890 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sh2d1aO88890 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sh2d1aO88890 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sh2d1aO88890 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sh2d1aO88890 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sh2d1aO88890 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC11.76□□□□□ -0.53
Sh2d1aO88890 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC11.76□□□□□ -0.53
Sh2d1aO88890 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sh2d1aO88890 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sh2d1aO88890 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sh2d1aO88890 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sh2d1aO88890 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sh2d1aO88890 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sh2d1aO88890 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sh2d1aO88890 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sh2d1aO88890 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sh2d1aO88890 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Sh2d1aO88890 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sh2d1aO88890 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sh2d1aO88890 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sh2d1aO88890 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sh2d1aO88890 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms