Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tnfrsf17O88472 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Tnfrsf17O88472 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tnfrsf17O88472 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tnfrsf17O88472 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC15.43■□□□□ 0.06
Tnfrsf17O88472 Mir8117-201ENSMUST00000184773 107 ntBASIC15.43■□□□□ 0.06
Tnfrsf17O88472 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tnfrsf17O88472 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tnfrsf17O88472 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tnfrsf17O88472 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tnfrsf17O88472 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Tnfrsf17O88472 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC15.43■□□□□ 0.06
Tnfrsf17O88472 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tnfrsf17O88472 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tnfrsf17O88472 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC15.43■□□□□ 0.06
Tnfrsf17O88472 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tnfrsf17O88472 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Tnfrsf17O88472 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tnfrsf17O88472 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tnfrsf17O88472 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tnfrsf17O88472 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tnfrsf17O88472 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tnfrsf17O88472 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tnfrsf17O88472 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Tnfrsf17O88472 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC15.42■□□□□ 0.06
Tnfrsf17O88472 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tnfrsf17O88472 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Tnfrsf17O88472 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tnfrsf17O88472 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tnfrsf17O88472 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Tnfrsf17O88472 Gm11025-201ENSMUST00000140773 466 ntBASIC15.42■□□□□ 0.06
Tnfrsf17O88472 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.42■□□□□ 0.06
Tnfrsf17O88472 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tnfrsf17O88472 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Tnfrsf17O88472 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Tnfrsf17O88472 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Tnfrsf17O88472 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Tnfrsf17O88472 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tnfrsf17O88472 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tnfrsf17O88472 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC15.42■□□□□ 0.06
Tnfrsf17O88472 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnfrsf17O88472 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnfrsf17O88472 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Tnfrsf17O88472 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.41■□□□□ 0.06
Tnfrsf17O88472 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnfrsf17O88472 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Tnfrsf17O88472 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnfrsf17O88472 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Tnfrsf17O88472 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnfrsf17O88472 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Tnfrsf17O88472 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnfrsf17O88472 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnfrsf17O88472 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnfrsf17O88472 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC15.41■□□□□ 0.06
Tnfrsf17O88472 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Tnfrsf17O88472 Mir6956-201ENSMUST00000183598 62 ntBASIC15.41■□□□□ 0.06
Tnfrsf17O88472 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.41■□□□□ 0.06
Tnfrsf17O88472 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnfrsf17O88472 Gm15500-202ENSMUST00000071641 1019 ntBASIC15.41■□□□□ 0.06
Tnfrsf17O88472 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Tnfrsf17O88472 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnfrsf17O88472 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnfrsf17O88472 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnfrsf17O88472 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnfrsf17O88472 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnfrsf17O88472 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Tnfrsf17O88472 Wnt10b-204ENSMUST00000226655 1807 ntBASIC15.4■□□□□ 0.06
Tnfrsf17O88472 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC15.4■□□□□ 0.06
Tnfrsf17O88472 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tnfrsf17O88472 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tnfrsf17O88472 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tnfrsf17O88472 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC15.4■□□□□ 0.06
Tnfrsf17O88472 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Tnfrsf17O88472 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.4■□□□□ 0.06
Tnfrsf17O88472 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Tnfrsf17O88472 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tnfrsf17O88472 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tnfrsf17O88472 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC15.4■□□□□ 0.06
Tnfrsf17O88472 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tnfrsf17O88472 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC15.4■□□□□ 0.06
Tnfrsf17O88472 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC15.4■□□□□ 0.06
Tnfrsf17O88472 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tnfrsf17O88472 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.4■□□□□ 0.06
Tnfrsf17O88472 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Tnfrsf17O88472 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tnfrsf17O88472 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tnfrsf17O88472 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tnfrsf17O88472 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tnfrsf17O88472 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tnfrsf17O88472 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC15.39■□□□□ 0.05
Tnfrsf17O88472 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Tnfrsf17O88472 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC15.39■□□□□ 0.05
Tnfrsf17O88472 AC174742.1-201ENSMUST00000218272 304 ntBASIC15.39■□□□□ 0.05
Tnfrsf17O88472 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Tnfrsf17O88472 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Tnfrsf17O88472 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC15.39■□□□□ 0.05
Tnfrsf17O88472 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Tnfrsf17O88472 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tnfrsf17O88472 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Tnfrsf17O88472 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms