Protein–RNA interactions for Protein: O35449

Prrt1, Proline-rich transmembrane protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt1O35449 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Prrt1O35449 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Prrt1O35449 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC14.12□□□□□ -0.15
Prrt1O35449 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prrt1O35449 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prrt1O35449 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC14.12□□□□□ -0.15
Prrt1O35449 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC14.12□□□□□ -0.15
Prrt1O35449 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prrt1O35449 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC14.12□□□□□ -0.15
Prrt1O35449 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Prrt1O35449 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prrt1O35449 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prrt1O35449 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Prrt1O35449 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Prrt1O35449 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prrt1O35449 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prrt1O35449 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prrt1O35449 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prrt1O35449 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.12□□□□□ -0.15
Prrt1O35449 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Prrt1O35449 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prrt1O35449 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Prrt1O35449 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prrt1O35449 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prrt1O35449 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Prrt1O35449 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prrt1O35449 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Prrt1O35449 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prrt1O35449 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.11□□□□□ -0.15
Prrt1O35449 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Prrt1O35449 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC14.11□□□□□ -0.15
Prrt1O35449 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prrt1O35449 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Prrt1O35449 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prrt1O35449 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC14.11□□□□□ -0.15
Prrt1O35449 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prrt1O35449 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prrt1O35449 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prrt1O35449 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.11□□□□□ -0.15
Prrt1O35449 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Prrt1O35449 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prrt1O35449 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
Prrt1O35449 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prrt1O35449 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prrt1O35449 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC14.11□□□□□ -0.15
Prrt1O35449 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prrt1O35449 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Prrt1O35449 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prrt1O35449 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.11□□□□□ -0.15
Prrt1O35449 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Prrt1O35449 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Prrt1O35449 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Prrt1O35449 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prrt1O35449 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prrt1O35449 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prrt1O35449 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Prrt1O35449 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Prrt1O35449 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
Prrt1O35449 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Prrt1O35449 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prrt1O35449 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prrt1O35449 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prrt1O35449 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prrt1O35449 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prrt1O35449 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prrt1O35449 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prrt1O35449 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prrt1O35449 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prrt1O35449 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Prrt1O35449 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Prrt1O35449 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prrt1O35449 Mir6349-201ENSMUST00000184059 97 ntBASIC14.1□□□□□ -0.15
Prrt1O35449 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prrt1O35449 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prrt1O35449 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prrt1O35449 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.1□□□□□ -0.15
Prrt1O35449 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prrt1O35449 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Prrt1O35449 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Prrt1O35449 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Prrt1O35449 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prrt1O35449 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prrt1O35449 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prrt1O35449 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC14.09□□□□□ -0.15
Prrt1O35449 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prrt1O35449 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prrt1O35449 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prrt1O35449 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Prrt1O35449 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prrt1O35449 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prrt1O35449 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prrt1O35449 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prrt1O35449 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prrt1O35449 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.09□□□□□ -0.15
Prrt1O35449 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prrt1O35449 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC14.09□□□□□ -0.15
Prrt1O35449 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC14.09□□□□□ -0.15
Prrt1O35449 Gm44549-201ENSMUST00000208351 577 ntBASIC14.09□□□□□ -0.15
Prrt1O35449 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC14.09□□□□□ -0.15
Prrt1O35449 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms